RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 CCDC136Q96JN2 1154 aa9.46□□□□□ -0.89
RNPC3-209ENST00000533834 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.89
RNPC3-209ENST00000533834 CHD2O14647 1828 aaKnown RBP9.46□□□□□ -0.9
RNPC3-209ENST00000533834 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.9
RNPC3-209ENST00000533834 BCAR3O75815 825 aa9.46□□□□□ -0.9
RNPC3-209ENST00000533834 GGT6Q6P531 493 aa9.46□□□□□ -0.9
RNPC3-209ENST00000533834 CCDC146Q8IYE0 955 aa9.46□□□□□ -0.9
RNPC3-209ENST00000533834 OVOS2A0A0J9YW53 1432 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 OVOS2Q6IE36 1432 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 E9PSI1 815 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 FYB1O15117 783 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 PIK3R4Q99570 1358 aa9.45□□□□□ -0.9
RNPC3-209ENST00000533834 IGHDP01880 384 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 PDE4AP27815 886 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 WDR63Q8IWG1 891 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 SIRT1Q96EB6 747 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
RNPC3-209ENST00000533834 EVC2Q86UK5 1308 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
RNPC3-209ENST00000533834 RARSP54136 660 aaKnown RBP9.43□□□□□ -0.9
RNPC3-209ENST00000533834 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
RNPC3-209ENST00000533834 RLBP1P12271 317 aa9.43□□□□□ -0.9
RNPC3-209ENST00000533834 CGNL1Q0VF96 1302 aa9.43□□□□□ -0.9
RNPC3-209ENST00000533834 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
RNPC3-209ENST00000533834 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
RNPC3-209ENST00000533834 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
RNPC3-209ENST00000533834 MED1Q15648 1581 aaPredicted RBP9.42□□□□□ -0.9
RNPC3-209ENST00000533834 MTHFSP49914 203 aa9.42□□□□□ -0.9
RNPC3-209ENST00000533834 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
RNPC3-209ENST00000533834 CENPQQ7L2Z9 268 aaPredicted RBP9.42□□□□□ -0.9
RNPC3-209ENST00000533834 CABP2Q9NPB3 220 aa9.42□□□□□ -0.9
RNPC3-209ENST00000533834 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
RNPC3-209ENST00000533834 RGS12O14924 1447 aa9.42□□□□□ -0.9
RNPC3-209ENST00000533834 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
RNPC3-209ENST00000533834 PTCH1Q13635 1447 aa9.41□□□□□ -0.9
RNPC3-209ENST00000533834 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
RNPC3-209ENST00000533834 LTN1O94822 1766 aa9.4□□□□□ -0.9
RNPC3-209ENST00000533834 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
RNPC3-209ENST00000533834 LMO7Q8WWI1 1683 aa9.4□□□□□ -0.9
RNPC3-209ENST00000533834 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
RNPC3-209ENST00000533834 IL16Q14005 1332 aa9.4□□□□□ -0.91
RNPC3-209ENST00000533834 ADAMTSL3P82987 1691 aa9.4□□□□□ -0.91
RNPC3-209ENST00000533834 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.91
RNPC3-209ENST00000533834 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.91
RNPC3-209ENST00000533834 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
RNPC3-209ENST00000533834 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
RNPC3-209ENST00000533834 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
RNPC3-209ENST00000533834 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
RNPC3-209ENST00000533834 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
RNPC3-209ENST00000533834 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
RNPC3-209ENST00000533834 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
RNPC3-209ENST00000533834 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
RNPC3-209ENST00000533834 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
RNPC3-209ENST00000533834 ZNF853P0CG23 659 aa9.38□□□□□ -0.91
RNPC3-209ENST00000533834 PPP4R3CPQ6ZMV5 832 aa9.37□□□□□ -0.91
RNPC3-209ENST00000533834 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
RNPC3-209ENST00000533834 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
RNPC3-209ENST00000533834 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
RNPC3-209ENST00000533834 POLKQ9UBT6 870 aa9.36□□□□□ -0.91
RNPC3-209ENST00000533834 NFAT5O94916 1531 aa9.35□□□□□ -0.91
RNPC3-209ENST00000533834 IL13P35225 146 aa9.35□□□□□ -0.91
RNPC3-209ENST00000533834 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
RNPC3-209ENST00000533834 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
RNPC3-209ENST00000533834 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
RNPC3-209ENST00000533834 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
RNPC3-209ENST00000533834 CT47B1P0C2W7 299 aaPredicted RBP9.34□□□□□ -0.91
RNPC3-209ENST00000533834 CEP170BQ9Y4F5 1589 aaPredicted RBP9.34□□□□□ -0.91
RNPC3-209ENST00000533834 CACNA1FO60840 1977 aa9.34□□□□□ -0.91
RNPC3-209ENST00000533834 USP6P35125 1406 aa9.34□□□□□ -0.91
RNPC3-209ENST00000533834 NCOA3Q9Y6Q9 1424 aa9.34□□□□□ -0.91
RNPC3-209ENST00000533834 SEC24BO95487 1268 aa9.34□□□□□ -0.91
RNPC3-209ENST00000533834 NCAPD2Q15021 1401 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 AAMPQ13685 434 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 CLUAP1Q96AJ1 413 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 LMTK3Q96Q04 1460 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 CYB5RLQ6IPT4 315 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
RNPC3-209ENST00000533834 CRB1P82279 1406 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 TNRQ92752 1358 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 WAPLQ7Z5K2 1190 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 GLI3P10071 1580 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 STRCP1A6NGW2 1772 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
RNPC3-209ENST00000533834 ALS2Q96Q42 1657 aa9.31□□□□□ -0.92
RNPC3-209ENST00000533834 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
RNPC3-209ENST00000533834 CABP1Q9NZU7 370 aa9.31□□□□□ -0.92
RNPC3-209ENST00000533834 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
RNPC3-209ENST00000533834 KDRP35968 1356 aa9.31□□□□□ -0.92
RNPC3-209ENST00000533834 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
RNPC3-209ENST00000533834 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
RNPC3-209ENST00000533834 ATP10DQ9P241 1426 aa9.3□□□□□ -0.92
RNPC3-209ENST00000533834 PHACTR3Q96KR7 559 aa9.3□□□□□ -0.92
RNPC3-209ENST00000533834 ANTXR1Q9H6X2 564 aa9.3□□□□□ -0.92
RNPC3-209ENST00000533834 HDAC1Q13547 482 aaPredicted RBP9.3□□□□□ -0.92
RNPC3-209ENST00000533834 MST1RQ04912 1400 aa9.3□□□□□ -0.92
RNPC3-209ENST00000533834 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
RNPC3-209ENST00000533834 NCKAP5LQ9HCH0 1330 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 COL18A1P39060 1754 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms