RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
SVIP-205ENST00000533774 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
SVIP-205ENST00000533774 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
SVIP-205ENST00000533774 YY1P25490 414 aa18.59■□□□□ 0.57
SVIP-205ENST00000533774 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
SVIP-205ENST00000533774 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
SVIP-205ENST00000533774 ADGRB2O60241 1585 aa18.59■□□□□ 0.57
SVIP-205ENST00000533774 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.56
SVIP-205ENST00000533774 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
SVIP-205ENST00000533774 TRIM37O94972 964 aa18.56■□□□□ 0.56
SVIP-205ENST00000533774 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
SVIP-205ENST00000533774 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
SVIP-205ENST00000533774 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
SVIP-205ENST00000533774 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
SVIP-205ENST00000533774 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
SVIP-205ENST00000533774 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
SVIP-205ENST00000533774 PRR36Q9H6K5 1346 aa18.51■□□□□ 0.55
SVIP-205ENST00000533774 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
SVIP-205ENST00000533774 APBA3O96018 575 aa18.5■□□□□ 0.55
SVIP-205ENST00000533774 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
SVIP-205ENST00000533774 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
SVIP-205ENST00000533774 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
SVIP-205ENST00000533774 DHX57Q6P158 1386 aaKnown RBP18.49■□□□□ 0.55
SVIP-205ENST00000533774 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
SVIP-205ENST00000533774 PRDM11Q9NQV5 511 aa18.48■□□□□ 0.55
SVIP-205ENST00000533774 CHRNA2Q15822 529 aa18.47■□□□□ 0.55
SVIP-205ENST00000533774 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
SVIP-205ENST00000533774 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
SVIP-205ENST00000533774 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
SVIP-205ENST00000533774 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
SVIP-205ENST00000533774 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
SVIP-205ENST00000533774 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
SVIP-205ENST00000533774 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
SVIP-205ENST00000533774 POGKQ9P215 609 aa18.44■□□□□ 0.54
SVIP-205ENST00000533774 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
SVIP-205ENST00000533774 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
SVIP-205ENST00000533774 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
SVIP-205ENST00000533774 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
SVIP-205ENST00000533774 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
SVIP-205ENST00000533774 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
SVIP-205ENST00000533774 KCNQ2O43526 872 aa18.41■□□□□ 0.54
SVIP-205ENST00000533774 SPON1Q9HCB6 807 aa18.41■□□□□ 0.54
SVIP-205ENST00000533774 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
SVIP-205ENST00000533774 LMO7Q8WWI1 1683 aa18.4■□□□□ 0.54
SVIP-205ENST00000533774 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
SVIP-205ENST00000533774 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
SVIP-205ENST00000533774 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
SVIP-205ENST00000533774 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
SVIP-205ENST00000533774 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
SVIP-205ENST00000533774 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
SVIP-205ENST00000533774 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
SVIP-205ENST00000533774 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
SVIP-205ENST00000533774 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
SVIP-205ENST00000533774 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
SVIP-205ENST00000533774 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
SVIP-205ENST00000533774 NUTM2GQ5VZR2 741 aa18.38■□□□□ 0.53
SVIP-205ENST00000533774 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
SVIP-205ENST00000533774 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
SVIP-205ENST00000533774 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
SVIP-205ENST00000533774 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
SVIP-205ENST00000533774 LARP1Q6PKG0 1096 aaKnown RBP18.37■□□□□ 0.53
SVIP-205ENST00000533774 CHD4Q14839 1912 aa18.37■□□□□ 0.53
SVIP-205ENST00000533774 ATP7BP35670 1465 aa18.36■□□□□ 0.53
SVIP-205ENST00000533774 MYOM1P52179 1685 aa18.36■□□□□ 0.53
SVIP-205ENST00000533774 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
SVIP-205ENST00000533774 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
SVIP-205ENST00000533774 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
SVIP-205ENST00000533774 ANO8Q9HCE9 1232 aaPredicted RBP18.34■□□□□ 0.53
SVIP-205ENST00000533774 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
SVIP-205ENST00000533774 UTRNP46939 3433 aa18.33■□□□□ 0.53
SVIP-205ENST00000533774 ZNF784Q8NCA9 323 aaPredicted RBP18.33■□□□□ 0.52
SVIP-205ENST00000533774 EVA1CP58658 441 aa18.32■□□□□ 0.52
SVIP-205ENST00000533774 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
SVIP-205ENST00000533774 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
SVIP-205ENST00000533774 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
SVIP-205ENST00000533774 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
SVIP-205ENST00000533774 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
SVIP-205ENST00000533774 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
SVIP-205ENST00000533774 WNK3Q9BYP7 1800 aa18.28■□□□□ 0.52
SVIP-205ENST00000533774 PTGER2P43116 358 aa18.28■□□□□ 0.52
SVIP-205ENST00000533774 PROM2Q8N271 834 aa18.27■□□□□ 0.52
SVIP-205ENST00000533774 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.51
SVIP-205ENST00000533774 CPDO75976 1380 aa18.27■□□□□ 0.51
SVIP-205ENST00000533774 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
SVIP-205ENST00000533774 PLSCR1O15162 318 aa18.26■□□□□ 0.51
SVIP-205ENST00000533774 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
SVIP-205ENST00000533774 USP19O94966 1318 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 ACEP12821 1306 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 OVOS2A0A0G2JMS6 1433 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
SVIP-205ENST00000533774 THRAP3Q9Y2W1 955 aaKnown RBP18.25■□□□□ 0.51
SVIP-205ENST00000533774 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
SVIP-205ENST00000533774 COL18A1P39060 1754 aa18.24■□□□□ 0.51
SVIP-205ENST00000533774 RGPD5Q99666 1765 aa18.23■□□□□ 0.51
SVIP-205ENST00000533774 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
SVIP-205ENST00000533774 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
SVIP-205ENST00000533774 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
SVIP-205ENST00000533774 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms