RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ADGRB2O60241 1585 aa11.71□□□□□ -0.53
NXF1-215ENST00000533440 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.53
NXF1-215ENST00000533440 YY1P25490 414 aa11.71□□□□□ -0.53
NXF1-215ENST00000533440 PRAM1Q96QH2 718 aa11.71□□□□□ -0.53
NXF1-215ENST00000533440 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
NXF1-215ENST00000533440 CRYBG1Q9Y4K1 1723 aa11.7□□□□□ -0.54
NXF1-215ENST00000533440 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
NXF1-215ENST00000533440 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
NXF1-215ENST00000533440 FAM196AQ6ZSG2 479 aa11.7□□□□□ -0.54
NXF1-215ENST00000533440 GPRASP1Q5JY77 1395 aa11.69□□□□□ -0.54
NXF1-215ENST00000533440 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
NXF1-215ENST00000533440 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
NXF1-215ENST00000533440 TRIM37O94972 964 aa11.69□□□□□ -0.54
NXF1-215ENST00000533440 RREB1Q92766 1687 aa11.68□□□□□ -0.54
NXF1-215ENST00000533440 APBA3O96018 575 aa11.68□□□□□ -0.54
NXF1-215ENST00000533440 MPHOSPH9Q99550 1183 aa11.68□□□□□ -0.54
NXF1-215ENST00000533440 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
NXF1-215ENST00000533440 PRR36Q9H6K5 1346 aa11.67□□□□□ -0.54
NXF1-215ENST00000533440 POGKQ9P215 609 aa11.67□□□□□ -0.54
NXF1-215ENST00000533440 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
NXF1-215ENST00000533440 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
NXF1-215ENST00000533440 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
NXF1-215ENST00000533440 KIAA0232Q92628 1395 aa11.65□□□□□ -0.55
NXF1-215ENST00000533440 UTRNP46939 3433 aa11.64□□□□□ -0.55
NXF1-215ENST00000533440 ADGRB1O14514 1584 aa11.64□□□□□ -0.55
NXF1-215ENST00000533440 NBPF8Q3BBV2 869 aa11.64□□□□□ -0.55
NXF1-215ENST00000533440 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
NXF1-215ENST00000533440 BARGINQ6ZT62 677 aa11.64□□□□□ -0.55
NXF1-215ENST00000533440 HIRIP3Q9BW71 556 aaPredicted RBP11.64□□□□□ -0.55
NXF1-215ENST00000533440 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
NXF1-215ENST00000533440 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
NXF1-215ENST00000533440 CHRNA2Q15822 529 aa11.63□□□□□ -0.55
NXF1-215ENST00000533440 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
NXF1-215ENST00000533440 SPON1Q9HCB6 807 aa11.63□□□□□ -0.55
NXF1-215ENST00000533440 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
NXF1-215ENST00000533440 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
NXF1-215ENST00000533440 MINK1Q8N4C8 1332 aaPredicted RBP11.62□□□□□ -0.55
NXF1-215ENST00000533440 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
NXF1-215ENST00000533440 KCNQ2O43526 872 aa11.62□□□□□ -0.55
NXF1-215ENST00000533440 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
NXF1-215ENST00000533440 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
NXF1-215ENST00000533440 SSH2Q76I76 1423 aa11.61□□□□□ -0.55
NXF1-215ENST00000533440 PPP1R1BQ9UD71 204 aaPredicted RBP11.61□□□□□ -0.55
NXF1-215ENST00000533440 ATP7BP35670 1465 aa11.6□□□□□ -0.55
NXF1-215ENST00000533440 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
NXF1-215ENST00000533440 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
NXF1-215ENST00000533440 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
NXF1-215ENST00000533440 CAMTA1Q9Y6Y1 1673 aa11.59□□□□□ -0.55
NXF1-215ENST00000533440 EVA1CP58658 441 aa11.58□□□□□ -0.56
NXF1-215ENST00000533440 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
NXF1-215ENST00000533440 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
NXF1-215ENST00000533440 NUDT16Q96DE0 195 aaKnown RBP11.58□□□□□ -0.56
NXF1-215ENST00000533440 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
NXF1-215ENST00000533440 LMO7Q8WWI1 1683 aa11.58□□□□□ -0.56
NXF1-215ENST00000533440 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
NXF1-215ENST00000533440 CPDO75976 1380 aa11.57□□□□□ -0.56
NXF1-215ENST00000533440 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
NXF1-215ENST00000533440 PARP4Q9UKK3 1724 aaKnown RBP11.57□□□□□ -0.56
NXF1-215ENST00000533440 RGPD3A6NKT7 1758 aaPredicted RBP11.56□□□□□ -0.56
NXF1-215ENST00000533440 RGPD4Q7Z3J3 1758 aa11.56□□□□□ -0.56
NXF1-215ENST00000533440 POLR3AO14802 1390 aaPredicted RBP11.56□□□□□ -0.56
NXF1-215ENST00000533440 PLSCR1O15162 318 aa11.56□□□□□ -0.56
NXF1-215ENST00000533440 NUTM2GQ5VZR2 741 aa11.56□□□□□ -0.56
NXF1-215ENST00000533440 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
NXF1-215ENST00000533440 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
NXF1-215ENST00000533440 CASZ1Q86V15 1759 aa11.55□□□□□ -0.56
NXF1-215ENST00000533440 USP19O94966 1318 aa11.55□□□□□ -0.56
NXF1-215ENST00000533440 OVOS2A0A0G2JMS6 1433 aa11.54□□□□□ -0.56
NXF1-215ENST00000533440 OVOS2A0A0J9YW53 1432 aa11.54□□□□□ -0.56
NXF1-215ENST00000533440 OVOS2Q6IE36 1432 aa11.54□□□□□ -0.56
NXF1-215ENST00000533440 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
NXF1-215ENST00000533440 ANO8Q9HCE9 1232 aaPredicted RBP11.54□□□□□ -0.56
NXF1-215ENST00000533440 ACEP12821 1306 aa11.54□□□□□ -0.56
NXF1-215ENST00000533440 TOPAZ1Q8N9V7 1692 aa11.53□□□□□ -0.56
NXF1-215ENST00000533440 COL5A2P05997 1499 aaPredicted RBP11.53□□□□□ -0.56
NXF1-215ENST00000533440 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
NXF1-215ENST00000533440 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
NXF1-215ENST00000533440 SBF2Q86WG5 1849 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 GCP02774 474 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 PTGER2P43116 358 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 ABTB2Q8N961 1025 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
NXF1-215ENST00000533440 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 CRB1P82279 1406 aa11.52□□□□□ -0.57
NXF1-215ENST00000533440 PROM2Q8N271 834 aa11.51□□□□□ -0.57
NXF1-215ENST00000533440 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
NXF1-215ENST00000533440 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
NXF1-215ENST00000533440 MYOM1P52179 1685 aa11.5□□□□□ -0.57
NXF1-215ENST00000533440 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
NXF1-215ENST00000533440 NLRP13Q86W25 1043 aa11.5□□□□□ -0.57
NXF1-215ENST00000533440 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
NXF1-215ENST00000533440 BCL9O00512 1426 aa11.5□□□□□ -0.57
NXF1-215ENST00000533440 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
NXF1-215ENST00000533440 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
NXF1-215ENST00000533440 DDB1Q16531 1140 aa11.49□□□□□ -0.57
NXF1-215ENST00000533440 SYT17Q9BSW7 474 aa11.48□□□□□ -0.57
NXF1-215ENST00000533440 AATKQ6ZMQ8 1374 aa11.48□□□□□ -0.57
NXF1-215ENST00000533440 BRD4O60885 1362 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms