RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KCNQ2O43526 872 aa16.82■□□□□ 0.28
TRAPPC4-213ENST00000533149 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-213ENST00000533149 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC4-213ENST00000533149 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
TRAPPC4-213ENST00000533149 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
TRAPPC4-213ENST00000533149 GPRASP1Q5JY77 1395 aa16.79■□□□□ 0.28
TRAPPC4-213ENST00000533149 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
TRAPPC4-213ENST00000533149 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
TRAPPC4-213ENST00000533149 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
TRAPPC4-213ENST00000533149 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
TRAPPC4-213ENST00000533149 RREB1Q92766 1687 aa16.78■□□□□ 0.28
TRAPPC4-213ENST00000533149 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
TRAPPC4-213ENST00000533149 IFFO2Q5TF58 517 aa16.76■□□□□ 0.27
TRAPPC4-213ENST00000533149 ZNF784Q8NCA9 323 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC4-213ENST00000533149 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
TRAPPC4-213ENST00000533149 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
TRAPPC4-213ENST00000533149 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC4-213ENST00000533149 SPATA31E1Q6ZUB1 1445 aa16.75■□□□□ 0.27
TRAPPC4-213ENST00000533149 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
TRAPPC4-213ENST00000533149 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
TRAPPC4-213ENST00000533149 PRAM1Q96QH2 718 aa16.74■□□□□ 0.27
TRAPPC4-213ENST00000533149 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
TRAPPC4-213ENST00000533149 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC4-213ENST00000533149 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
TRAPPC4-213ENST00000533149 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
TRAPPC4-213ENST00000533149 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
TRAPPC4-213ENST00000533149 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-213ENST00000533149 POGKQ9P215 609 aa16.72■□□□□ 0.27
TRAPPC4-213ENST00000533149 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-213ENST00000533149 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
TRAPPC4-213ENST00000533149 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
TRAPPC4-213ENST00000533149 EVA1CP58658 441 aa16.7■□□□□ 0.26
TRAPPC4-213ENST00000533149 KIAA0232Q92628 1395 aa16.7■□□□□ 0.26
TRAPPC4-213ENST00000533149 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
TRAPPC4-213ENST00000533149 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
TRAPPC4-213ENST00000533149 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
TRAPPC4-213ENST00000533149 CRYBG1Q9Y4K1 1723 aa16.69■□□□□ 0.26
TRAPPC4-213ENST00000533149 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
TRAPPC4-213ENST00000533149 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
TRAPPC4-213ENST00000533149 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
TRAPPC4-213ENST00000533149 DLC1Q96QB1 1528 aa16.66■□□□□ 0.26
TRAPPC4-213ENST00000533149 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
TRAPPC4-213ENST00000533149 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-213ENST00000533149 PLSCR1O15162 318 aa16.65■□□□□ 0.26
TRAPPC4-213ENST00000533149 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-213ENST00000533149 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
TRAPPC4-213ENST00000533149 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-213ENST00000533149 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
TRAPPC4-213ENST00000533149 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
TRAPPC4-213ENST00000533149 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC4-213ENST00000533149 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-213ENST00000533149 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 ZBTB7AO95365 584 aa16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 PTGER2P43116 358 aa16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
TRAPPC4-213ENST00000533149 CASZ1Q86V15 1759 aa16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 ATP7BP35670 1465 aa16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-213ENST00000533149 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-213ENST00000533149 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-213ENST00000533149 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.24
TRAPPC4-213ENST00000533149 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-213ENST00000533149 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
TRAPPC4-213ENST00000533149 MYOM1P52179 1685 aa16.58■□□□□ 0.24
TRAPPC4-213ENST00000533149 MSH5O43196 834 aa16.57■□□□□ 0.24
TRAPPC4-213ENST00000533149 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
TRAPPC4-213ENST00000533149 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-213ENST00000533149 CPDO75976 1380 aa16.57■□□□□ 0.24
TRAPPC4-213ENST00000533149 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-213ENST00000533149 CHD4Q14839 1912 aa16.56■□□□□ 0.24
TRAPPC4-213ENST00000533149 STK32BQ9NY57 414 aa16.55■□□□□ 0.24
TRAPPC4-213ENST00000533149 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-213ENST00000533149 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-213ENST00000533149 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
TRAPPC4-213ENST00000533149 DDB1Q16531 1140 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 PROM2Q8N271 834 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
TRAPPC4-213ENST00000533149 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.24
TRAPPC4-213ENST00000533149 CRB1P82279 1406 aa16.52■□□□□ 0.24
TRAPPC4-213ENST00000533149 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
TRAPPC4-213ENST00000533149 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-213ENST00000533149 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-213ENST00000533149 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
TRAPPC4-213ENST00000533149 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
TRAPPC4-213ENST00000533149 GCP02774 474 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 ARXQ96QS3 562 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 USP19O94966 1318 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 ACEP12821 1306 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms