RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 PDE3BQ13370 1112 aa14.83□□□□□ -0.04
CHMP4A-206ENST00000533011 PIK3C2GO75747 1445 aa14.83□□□□□ -0.04
CHMP4A-206ENST00000533011 NRAPQ86VF7 1730 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 COL14A1Q05707 1796 aaKnown RBP14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 SPATA31A1Q5TZJ5 1347 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 NRXN1Q9ULB1 1477 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 THSD7AQ9UPZ6 1657 aa14.81□□□□□ -0.04
CHMP4A-206ENST00000533011 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
CHMP4A-206ENST00000533011 BARGINQ6ZT62 677 aa14.79□□□□□ -0.04
CHMP4A-206ENST00000533011 RREB1Q92766 1687 aa14.78□□□□□ -0.04
CHMP4A-206ENST00000533011 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
CHMP4A-206ENST00000533011 C14orf93Q9H972 538 aaKnown RBP14.78□□□□□ -0.04
CHMP4A-206ENST00000533011 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
CHMP4A-206ENST00000533011 TMEM132EQ6IEE7 984 aa14.77□□□□□ -0.05
CHMP4A-206ENST00000533011 PRDM11Q9NQV5 511 aa14.77□□□□□ -0.05
CHMP4A-206ENST00000533011 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
CHMP4A-206ENST00000533011 PLSCR1O15162 318 aa14.76□□□□□ -0.05
CHMP4A-206ENST00000533011 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
CHMP4A-206ENST00000533011 KDM2AQ9Y2K7 1162 aa14.76□□□□□ -0.05
CHMP4A-206ENST00000533011 PLEKHH1Q9ULM0 1364 aa14.75□□□□□ -0.05
CHMP4A-206ENST00000533011 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
CHMP4A-206ENST00000533011 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
CHMP4A-206ENST00000533011 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
CHMP4A-206ENST00000533011 UTRNP46939 3433 aa14.74□□□□□ -0.05
CHMP4A-206ENST00000533011 YTHDC2Q9H6S0 1430 aaKnown RBP14.74□□□□□ -0.05
CHMP4A-206ENST00000533011 KNDC1Q76NI1 1749 aa14.73□□□□□ -0.05
CHMP4A-206ENST00000533011 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
CHMP4A-206ENST00000533011 PMFBP1Q8TBY8 1022 aa14.73□□□□□ -0.05
CHMP4A-206ENST00000533011 SYT17Q9BSW7 474 aa14.73□□□□□ -0.05
CHMP4A-206ENST00000533011 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
CHMP4A-206ENST00000533011 EVA1CP58658 441 aa14.72□□□□□ -0.05
CHMP4A-206ENST00000533011 CAMTA1Q9Y6Y1 1673 aa14.71□□□□□ -0.06
CHMP4A-206ENST00000533011 CHD4Q14839 1912 aa14.7□□□□□ -0.06
CHMP4A-206ENST00000533011 TCP11L2Q8N4U5 519 aa14.7□□□□□ -0.06
CHMP4A-206ENST00000533011 STRN4Q9NRL3 753 aa14.7□□□□□ -0.06
CHMP4A-206ENST00000533011 EIF3AQ14152 1382 aaKnown RBP14.7□□□□□ -0.06
CHMP4A-206ENST00000533011 PTGER2P43116 358 aa14.69□□□□□ -0.06
CHMP4A-206ENST00000533011 RGPD8O14715 1765 aaPredicted RBP14.69□□□□□ -0.06
CHMP4A-206ENST00000533011 SIN3AQ96ST3 1273 aa14.68□□□□□ -0.06
CHMP4A-206ENST00000533011 FHDC1Q9C0D6 1143 aaPredicted RBP14.68□□□□□ -0.06
CHMP4A-206ENST00000533011 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
CHMP4A-206ENST00000533011 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
CHMP4A-206ENST00000533011 KIAA0232Q92628 1395 aa14.67□□□□□ -0.06
CHMP4A-206ENST00000533011 ALS2Q96Q42 1657 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 ZBTB7AO95365 584 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 MTFR1LQ9H019 292 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 POGKQ9P215 609 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
CHMP4A-206ENST00000533011 NRKQ7Z2Y5 1582 aa14.65□□□□□ -0.06
CHMP4A-206ENST00000533011 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
CHMP4A-206ENST00000533011 PRAM1Q96QH2 718 aa14.65□□□□□ -0.06
CHMP4A-206ENST00000533011 TRPM3Q9HCF6 1732 aaPredicted RBP14.65□□□□□ -0.06
CHMP4A-206ENST00000533011 KIAA1210Q9ULL0 1709 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 STK32BQ9NY57 414 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 TRAK1Q9UPV9 953 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 RGPD3A6NKT7 1758 aaPredicted RBP14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 RGPD4Q7Z3J3 1758 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 CEP350Q5VT06 3117 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
CHMP4A-206ENST00000533011 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
CHMP4A-206ENST00000533011 OVOS2A0A0J9YW53 1432 aa14.63□□□□□ -0.07
CHMP4A-206ENST00000533011 OVOS2Q6IE36 1432 aa14.63□□□□□ -0.07
CHMP4A-206ENST00000533011 ZC3H6P61129 1189 aaKnown RBP14.62□□□□□ -0.07
CHMP4A-206ENST00000533011 GPR162Q16538 588 aa14.62□□□□□ -0.07
CHMP4A-206ENST00000533011 ARXQ96QS3 562 aa14.62□□□□□ -0.07
CHMP4A-206ENST00000533011 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
CHMP4A-206ENST00000533011 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
CHMP4A-206ENST00000533011 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHMP4A-206ENST00000533011 SLC15A2Q16348 729 aa14.61□□□□□ -0.07
CHMP4A-206ENST00000533011 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
CHMP4A-206ENST00000533011 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
CHMP4A-206ENST00000533011 PDGFDQ9GZP0 370 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-206ENST00000533011 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
CHMP4A-206ENST00000533011 PROM2Q8N271 834 aa14.59□□□□□ -0.07
CHMP4A-206ENST00000533011 MYOM1P52179 1685 aa14.58□□□□□ -0.07
CHMP4A-206ENST00000533011 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
CHMP4A-206ENST00000533011 CRYBG1Q9Y4K1 1723 aa14.58□□□□□ -0.07
CHMP4A-206ENST00000533011 WASLO00401 505 aaPredicted RBP14.58□□□□□ -0.08
CHMP4A-206ENST00000533011 DDB1Q16531 1140 aa14.58□□□□□ -0.08
CHMP4A-206ENST00000533011 CPDO75976 1380 aa14.58□□□□□ -0.08
CHMP4A-206ENST00000533011 BCL9O00512 1426 aa14.58□□□□□ -0.08
CHMP4A-206ENST00000533011 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
CHMP4A-206ENST00000533011 PCGF6Q9BYE7 350 aa14.57□□□□□ -0.08
CHMP4A-206ENST00000533011 ATP7BP35670 1465 aa14.57□□□□□ -0.08
CHMP4A-206ENST00000533011 TXNRD1Q16881 649 aa14.56□□□□□ -0.08
CHMP4A-206ENST00000533011 PARP4Q9UKK3 1724 aaKnown RBP14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 GRIN3BO60391 1043 aa14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 PRR36Q9H6K5 1346 aa14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms