RNA–Protein interactions for RNA: ENST00000532419.5

TCN1-203, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-203ENST00000532419 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
TCN1-203ENST00000532419 MRGPRX2Q96LB1 330 aa8.58□□□□□ -1.04
TCN1-203ENST00000532419 PBRM1Q86U86 1689 aa8.57□□□□□ -1.04
TCN1-203ENST00000532419 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
TCN1-203ENST00000532419 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
TCN1-203ENST00000532419 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
TCN1-203ENST00000532419 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
TCN1-203ENST00000532419 TRIM66O15016 1216 aa8.56□□□□□ -1.04
TCN1-203ENST00000532419 KDM4AO75164 1064 aa8.56□□□□□ -1.04
TCN1-203ENST00000532419 Q3C1V9 767 aa8.55□□□□□ -1.04
TCN1-203ENST00000532419 CHMP7Q8WUX9 453 aaPredicted RBP8.55□□□□□ -1.04
TCN1-203ENST00000532419 TDRD9Q8NDG6 1382 aaKnown RBP8.55□□□□□ -1.04
TCN1-203ENST00000532419 SNAPC4Q5SXM2 1469 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
TCN1-203ENST00000532419 MMP16P51512 607 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 HPS1Q92902 700 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
TCN1-203ENST00000532419 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 SOGA1O94964 1423 aa8.54□□□□□ -1.04
TCN1-203ENST00000532419 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
TCN1-203ENST00000532419 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
TCN1-203ENST00000532419 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
TCN1-203ENST00000532419 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
TCN1-203ENST00000532419 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
TCN1-203ENST00000532419 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
TCN1-203ENST00000532419 HOXA2O43364 376 aa8.5□□□□□ -1.05
TCN1-203ENST00000532419 RC3H1Q5TC82 1133 aaKnown RBP8.5□□□□□ -1.05
TCN1-203ENST00000532419 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
TCN1-203ENST00000532419 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
TCN1-203ENST00000532419 GAPVD1Q14C86 1478 aa8.5□□□□□ -1.05
TCN1-203ENST00000532419 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
TCN1-203ENST00000532419 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
TCN1-203ENST00000532419 PDE4DQ08499 809 aa8.49□□□□□ -1.05
TCN1-203ENST00000532419 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
TCN1-203ENST00000532419 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
TCN1-203ENST00000532419 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
TCN1-203ENST00000532419 GRIN2BQ13224 1484 aa8.48□□□□□ -1.05
TCN1-203ENST00000532419 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
TCN1-203ENST00000532419 FAM181BA6NEQ2 426 aa8.47□□□□□ -1.05
TCN1-203ENST00000532419 WNT7BP56706 349 aa8.47□□□□□ -1.05
TCN1-203ENST00000532419 BEGAINQ9BUH8 593 aa8.47□□□□□ -1.05
TCN1-203ENST00000532419 KRTAP4-6Q9BYQ5 205 aa8.47□□□□□ -1.05
TCN1-203ENST00000532419 ALDH1A1P00352 501 aa8.46□□□□□ -1.06
TCN1-203ENST00000532419 SKOR1P84550 965 aa8.46□□□□□ -1.06
TCN1-203ENST00000532419 ERCC6L2Q5T890 1561 aa8.46□□□□□ -1.06
TCN1-203ENST00000532419 TSPOAP1O95153 1857 aa8.46□□□□□ -1.06
TCN1-203ENST00000532419 CUX1P39880 1505 aa8.45□□□□□ -1.06
TCN1-203ENST00000532419 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
TCN1-203ENST00000532419 NXF1Q9UBU9 619 aaKnown RBP8.45□□□□□ -1.06
TCN1-203ENST00000532419 MS4A1P11836 297 aa8.44□□□□□ -1.06
TCN1-203ENST00000532419 GJA5P36382 358 aa8.44□□□□□ -1.06
TCN1-203ENST00000532419 FDX1P10109 184 aa8.42□□□□□ -1.06
TCN1-203ENST00000532419 GMPRP36959 345 aa8.42□□□□□ -1.06
TCN1-203ENST00000532419 HLA-CQ95604 372 aa8.42□□□□□ -1.06
TCN1-203ENST00000532419 ABCA5Q8WWZ7 1642 aa8.42□□□□□ -1.06
TCN1-203ENST00000532419 CEP170Q5SW79 1584 aa8.41□□□□□ -1.06
TCN1-203ENST00000532419 ZSCAN1Q8NBB4 408 aa8.41□□□□□ -1.06
TCN1-203ENST00000532419 IRF7Q92985 503 aa8.41□□□□□ -1.06
TCN1-203ENST00000532419 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
TCN1-203ENST00000532419 BMP1P13497 986 aa8.4□□□□□ -1.06
TCN1-203ENST00000532419 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
TCN1-203ENST00000532419 RETREG3Q86VR2 466 aa8.4□□□□□ -1.06
TCN1-203ENST00000532419 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
TCN1-203ENST00000532419 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
TCN1-203ENST00000532419 JUNDP17535 347 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 SHROOM2Q13796 1616 aa8.39□□□□□ -1.07
TCN1-203ENST00000532419 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 SIAH2O43255 324 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 NDUFV2P19404 249 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 VEGFBP49765 207 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 RSBN1LQ6PCB5 846 aaPredicted RBP8.38□□□□□ -1.07
TCN1-203ENST00000532419 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
TCN1-203ENST00000532419 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
TCN1-203ENST00000532419 ADAMTS12P58397 1594 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 SPTLC1O15269 473 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
TCN1-203ENST00000532419 MTMR2Q13614 643 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
TCN1-203ENST00000532419 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
TCN1-203ENST00000532419 NUDT12Q9BQG2 462 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
TCN1-203ENST00000532419 H3BM21 787 aa8.35□□□□□ -1.07
TCN1-203ENST00000532419 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
TCN1-203ENST00000532419 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
TCN1-203ENST00000532419 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
TCN1-203ENST00000532419 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
TCN1-203ENST00000532419 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
TCN1-203ENST00000532419 KDM6BO15054 1643 aa8.33□□□□□ -1.08
TCN1-203ENST00000532419 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
TCN1-203ENST00000532419 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
TCN1-203ENST00000532419 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
TCN1-203ENST00000532419 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms