RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 SPATA31A7Q8IWB4 1347 aa29.5■■■□□ 2.31
HIPK3-205ENST00000531504 EIF3AQ14152 1382 aaKnown RBP29.5■■■□□ 2.31
HIPK3-205ENST00000531504 CFAP70Q5T0N1 1121 aa29.49■■■□□ 2.31
HIPK3-205ENST00000531504 FAM182BQ5T319 152 aa29.47■■■□□ 2.31
HIPK3-205ENST00000531504 CRYBG1Q9Y4K1 1723 aa29.46■■■□□ 2.31
HIPK3-205ENST00000531504 ACIN1Q9UKV3 1341 aaKnown RBP29.44■■■□□ 2.3
HIPK3-205ENST00000531504 TULP4Q9NRJ4 1543 aa29.42■■■□□ 2.3
HIPK3-205ENST00000531504 PRDM11Q9NQV5 511 aa29.42■■■□□ 2.3
HIPK3-205ENST00000531504 PARD3Q8TEW0 1356 aa29.41■■■□□ 2.3
HIPK3-205ENST00000531504 EZH2Q15910 746 aaKnown RBP29.41■■■□□ 2.3
HIPK3-205ENST00000531504 FAM196AQ6ZSG2 479 aa29.4■■■□□ 2.3
HIPK3-205ENST00000531504 NGDNQ8NEJ9 315 aaKnown RBP29.37■■■□□ 2.29
HIPK3-205ENST00000531504 CAMKK2Q96RR4 588 aa29.37■■■□□ 2.29
HIPK3-205ENST00000531504 HIRIP3Q9BW71 556 aaPredicted RBP29.37■■■□□ 2.29
HIPK3-205ENST00000531504 SPATA31A1Q5TZJ5 1347 aa29.37■■■□□ 2.29
HIPK3-205ENST00000531504 ADGRB1O14514 1584 aa29.36■■■□□ 2.29
HIPK3-205ENST00000531504 PAK3O75914 559 aaPredicted RBP29.36■■■□□ 2.29
HIPK3-205ENST00000531504 TRIM37O94972 964 aa29.36■■■□□ 2.29
HIPK3-205ENST00000531504 ITSN1Q15811 1721 aa29.35■■■□□ 2.29
HIPK3-205ENST00000531504 PRR36Q9H6K5 1346 aa29.35■■■□□ 2.29
HIPK3-205ENST00000531504 MINK1Q8N4C8 1332 aaPredicted RBP29.34■■■□□ 2.29
HIPK3-205ENST00000531504 RREB1Q92766 1687 aa29.34■■■□□ 2.29
HIPK3-205ENST00000531504 TRAK1Q9UPV9 953 aa29.33■■■□□ 2.29
HIPK3-205ENST00000531504 PHRF1Q9P1Y6 1649 aaKnown RBP29.32■■■□□ 2.28
HIPK3-205ENST00000531504 APBA3O96018 575 aa29.32■■■□□ 2.28
HIPK3-205ENST00000531504 KIAA0232Q92628 1395 aa29.31■■■□□ 2.28
HIPK3-205ENST00000531504 WASLO00401 505 aaPredicted RBP29.31■■■□□ 2.28
HIPK3-205ENST00000531504 NUP188Q5SRE5 1749 aa29.29■■■□□ 2.28
HIPK3-205ENST00000531504 YY1P25490 414 aa29.29■■■□□ 2.28
HIPK3-205ENST00000531504 STRN4Q9NRL3 753 aa29.29■■■□□ 2.28
HIPK3-205ENST00000531504 ATP7BP35670 1465 aa29.29■■■□□ 2.28
HIPK3-205ENST00000531504 NBPF8Q3BBV2 869 aa29.27■■■□□ 2.28
HIPK3-205ENST00000531504 NBPF14Q5TI25 921 aa29.27■■■□□ 2.28
HIPK3-205ENST00000531504 PDE3BQ13370 1112 aa29.26■■■□□ 2.27
HIPK3-205ENST00000531504 CHRNA2Q15822 529 aa29.26■■■□□ 2.27
HIPK3-205ENST00000531504 BARGINQ6ZT62 677 aa29.24■■■□□ 2.27
HIPK3-205ENST00000531504 USP35Q9P2H5 1018 aa29.23■■■□□ 2.27
HIPK3-205ENST00000531504 SSH2Q76I76 1423 aa29.22■■■□□ 2.27
HIPK3-205ENST00000531504 EVA1CP58658 441 aa29.22■■■□□ 2.27
HIPK3-205ENST00000531504 DCAF8L1A6NGE4 600 aa29.21■■■□□ 2.27
HIPK3-205ENST00000531504 ZC3H6P61129 1189 aaKnown RBP29.21■■■□□ 2.27
HIPK3-205ENST00000531504 PPP1R1BQ9UD71 204 aaPredicted RBP29.2■■■□□ 2.26
HIPK3-205ENST00000531504 ARHGEF28Q8N1W1 1705 aaKnown RBP29.19■■■□□ 2.26
HIPK3-205ENST00000531504 SPON1Q9HCB6 807 aa29.18■■■□□ 2.26
HIPK3-205ENST00000531504 NUDT16Q96DE0 195 aaKnown RBP29.17■■■□□ 2.26
HIPK3-205ENST00000531504 NINLQ9Y2I6 1382 aa29.16■■■□□ 2.26
HIPK3-205ENST00000531504 NRKQ7Z2Y5 1582 aa29.16■■■□□ 2.26
HIPK3-205ENST00000531504 TCP11L2Q8N4U5 519 aa29.15■■■□□ 2.26
HIPK3-205ENST00000531504 C11orf95C9JLR9 678 aaPredicted RBP29.14■■■□□ 2.26
HIPK3-205ENST00000531504 NUTM2GQ5VZR2 741 aa29.14■■■□□ 2.26
HIPK3-205ENST00000531504 TOPAZ1Q8N9V7 1692 aa29.13■■■□□ 2.25
HIPK3-205ENST00000531504 LMO7Q8WWI1 1683 aa29.13■■■□□ 2.25
HIPK3-205ENST00000531504 CAMTA1Q9Y6Y1 1673 aa29.13■■■□□ 2.25
HIPK3-205ENST00000531504 STAC3Q96MF2 364 aa29.13■■■□□ 2.25
HIPK3-205ENST00000531504 KDM2AQ9Y2K7 1162 aa29.13■■■□□ 2.25
HIPK3-205ENST00000531504 PARP4Q9UKK3 1724 aaKnown RBP29.13■■■□□ 2.25
HIPK3-205ENST00000531504 POLR3AO14802 1390 aaPredicted RBP29.13■■■□□ 2.25
HIPK3-205ENST00000531504 THRAP3Q9Y2W1 955 aaKnown RBP29.12■■■□□ 2.25
HIPK3-205ENST00000531504 CPDO75976 1380 aa29.12■■■□□ 2.25
HIPK3-205ENST00000531504 KCNQ2O43526 872 aa29.11■■■□□ 2.25
HIPK3-205ENST00000531504 LARP1Q6PKG0 1096 aaKnown RBP29.11■■■□□ 2.25
HIPK3-205ENST00000531504 DCAF11Q8TEB1 546 aa29.11■■■□□ 2.25
HIPK3-205ENST00000531504 RGPD3A6NKT7 1758 aaPredicted RBP29.11■■■□□ 2.25
HIPK3-205ENST00000531504 RGPD4Q7Z3J3 1758 aa29.11■■■□□ 2.25
HIPK3-205ENST00000531504 ACEP12821 1306 aa29.08■■■□□ 2.25
HIPK3-205ENST00000531504 ABTB2Q8N961 1025 aa29.07■■■□□ 2.24
HIPK3-205ENST00000531504 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
HIPK3-205ENST00000531504 OVOS2A0A0G2JMS6 1433 aa29.05■■■□□ 2.24
HIPK3-205ENST00000531504 OVOS2A0A0J9YW53 1432 aa29.05■■■□□ 2.24
HIPK3-205ENST00000531504 OVOS2Q6IE36 1432 aa29.05■■■□□ 2.24
HIPK3-205ENST00000531504 CCDC61Q9Y6R9 512 aa29.05■■■□□ 2.24
HIPK3-205ENST00000531504 USP19O94966 1318 aa29.04■■■□□ 2.24
HIPK3-205ENST00000531504 COL5A2P05997 1499 aaPredicted RBP29.03■■■□□ 2.24
HIPK3-205ENST00000531504 PEAK1Q9H792 1746 aa29.02■■■□□ 2.24
HIPK3-205ENST00000531504 PLEKHG3A1L390 1219 aa29.01■■■□□ 2.23
HIPK3-205ENST00000531504 CRB1P82279 1406 aa29.01■■■□□ 2.23
HIPK3-205ENST00000531504 SBF2Q86WG5 1849 aa29■■■□□ 2.23
HIPK3-205ENST00000531504 NLRP13Q86W25 1043 aa29■■■□□ 2.23
HIPK3-205ENST00000531504 RAB3GAP2Q9H2M9 1393 aa28.99■■■□□ 2.23
HIPK3-205ENST00000531504 CASZ1Q86V15 1759 aa28.98■■■□□ 2.23
HIPK3-205ENST00000531504 LRRC37A3O60309 1634 aa28.98■■■□□ 2.23
HIPK3-205ENST00000531504 PLSCR1O15162 318 aa28.98■■■□□ 2.23
HIPK3-205ENST00000531504 GCP02774 474 aa28.97■■■□□ 2.23
HIPK3-205ENST00000531504 BRD4O60885 1362 aaPredicted RBP28.93■■■□□ 2.22
HIPK3-205ENST00000531504 DDB1Q16531 1140 aa28.93■■■□□ 2.22
HIPK3-205ENST00000531504 KIAA1210Q9ULL0 1709 aa28.92■■■□□ 2.22
HIPK3-205ENST00000531504 WNK3Q9BYP7 1800 aa28.91■■■□□ 2.22
HIPK3-205ENST00000531504 PPIP5K1Q6PFW1 1433 aa28.91■■■□□ 2.22
HIPK3-205ENST00000531504 BCL11BQ9C0K0 894 aaPredicted RBP28.9■■■□□ 2.22
HIPK3-205ENST00000531504 ANO8Q9HCE9 1232 aaPredicted RBP28.9■■■□□ 2.22
HIPK3-205ENST00000531504 AKAP12Q02952 1782 aa28.9■■■□□ 2.22
HIPK3-205ENST00000531504 AATKQ6ZMQ8 1374 aa28.89■■■□□ 2.22
HIPK3-205ENST00000531504 ZBTB7CA1YPR0 619 aa28.89■■■□□ 2.22
HIPK3-205ENST00000531504 MYOM1P52179 1685 aa28.89■■■□□ 2.21
HIPK3-205ENST00000531504 SRPK2P78362 688 aaKnown RBP28.87■■■□□ 2.21
HIPK3-205ENST00000531504 SLIT3O75094 1523 aa28.86■■■□□ 2.21
HIPK3-205ENST00000531504 TOM1L2Q6ZVM7 507 aa28.86■■■□□ 2.21
HIPK3-205ENST00000531504 ZBTB7AO95365 584 aa28.84■■■□□ 2.21
HIPK3-205ENST00000531504 CDCA7Q9BWT1 371 aaPredicted RBP28.84■■■□□ 2.21
HIPK3-205ENST00000531504 BCL9O00512 1426 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms