RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
VPS11-204ENST00000530809 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
VPS11-204ENST00000530809 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
VPS11-204ENST00000530809 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
VPS11-204ENST00000530809 ADGRF5Q8IZF2 1346 aa7.97□□□□□ -1.13
VPS11-204ENST00000530809 PHRF1Q9P1Y6 1649 aaKnown RBP7.96□□□□□ -1.13
VPS11-204ENST00000530809 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
VPS11-204ENST00000530809 FAM83GA6ND36 823 aa7.96□□□□□ -1.14
VPS11-204ENST00000530809 YY1P25490 414 aa7.96□□□□□ -1.14
VPS11-204ENST00000530809 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
VPS11-204ENST00000530809 DLC1Q96QB1 1528 aa7.96□□□□□ -1.14
VPS11-204ENST00000530809 EIF3AQ14152 1382 aaKnown RBP7.96□□□□□ -1.14
VPS11-204ENST00000530809 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
VPS11-204ENST00000530809 BTG4Q9NY30 223 aa7.95□□□□□ -1.14
VPS11-204ENST00000530809 SPATA31A5Q5VU36 1347 aa7.95□□□□□ -1.14
VPS11-204ENST00000530809 SPATA31A7Q8IWB4 1347 aa7.95□□□□□ -1.14
VPS11-204ENST00000530809 GPRASP1Q5JY77 1395 aa7.95□□□□□ -1.14
VPS11-204ENST00000530809 DHX57Q6P158 1386 aaKnown RBP7.95□□□□□ -1.14
VPS11-204ENST00000530809 CHD4Q14839 1912 aa7.94□□□□□ -1.14
VPS11-204ENST00000530809 SLC4A2P04920 1241 aa7.94□□□□□ -1.14
VPS11-204ENST00000530809 TMEM132EQ6IEE7 984 aa7.94□□□□□ -1.14
VPS11-204ENST00000530809 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
VPS11-204ENST00000530809 TULP4Q9NRJ4 1543 aa7.93□□□□□ -1.14
VPS11-204ENST00000530809 PARP4Q9UKK3 1724 aaKnown RBP7.93□□□□□ -1.14
VPS11-204ENST00000530809 EZH2Q15910 746 aaKnown RBP7.93□□□□□ -1.14
VPS11-204ENST00000530809 RGL3Q3MIN7 710 aa7.93□□□□□ -1.14
VPS11-204ENST00000530809 CAMKK2Q96RR4 588 aa7.93□□□□□ -1.14
VPS11-204ENST00000530809 SBF2Q86WG5 1849 aa7.93□□□□□ -1.14
VPS11-204ENST00000530809 NINLQ9Y2I6 1382 aa7.93□□□□□ -1.14
VPS11-204ENST00000530809 PLEKHG5O94827 1062 aa7.92□□□□□ -1.14
VPS11-204ENST00000530809 NBPF8Q3BBV2 869 aa7.92□□□□□ -1.14
VPS11-204ENST00000530809 NBPF14Q5TI25 921 aa7.92□□□□□ -1.14
VPS11-204ENST00000530809 ATP7BP35670 1465 aa7.92□□□□□ -1.14
VPS11-204ENST00000530809 C11orf95C9JLR9 678 aaPredicted RBP7.91□□□□□ -1.14
VPS11-204ENST00000530809 TRIM37O94972 964 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 APBA3O96018 575 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 C14orf93Q9H972 538 aaKnown RBP7.91□□□□□ -1.14
VPS11-204ENST00000530809 SPON1Q9HCB6 807 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 PRDM11Q9NQV5 511 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 PPP1R1BQ9UD71 204 aaPredicted RBP7.91□□□□□ -1.14
VPS11-204ENST00000530809 SPATA31A1Q5TZJ5 1347 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 CAMTA1Q9Y6Y1 1673 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 CASZ1Q86V15 1759 aa7.91□□□□□ -1.14
VPS11-204ENST00000530809 AKAP12Q02952 1782 aa7.9□□□□□ -1.14
VPS11-204ENST00000530809 ACIN1Q9UKV3 1341 aaKnown RBP7.9□□□□□ -1.14
VPS11-204ENST00000530809 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
VPS11-204ENST00000530809 PRAM1Q96QH2 718 aa7.9□□□□□ -1.14
VPS11-204ENST00000530809 POGKQ9P215 609 aa7.9□□□□□ -1.14
VPS11-204ENST00000530809 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
VPS11-204ENST00000530809 ARHGEF28Q8N1W1 1705 aaKnown RBP7.89□□□□□ -1.15
VPS11-204ENST00000530809 TOPAZ1Q8N9V7 1692 aa7.89□□□□□ -1.15
VPS11-204ENST00000530809 LMO7Q8WWI1 1683 aa7.89□□□□□ -1.15
VPS11-204ENST00000530809 KCNQ2O43526 872 aa7.89□□□□□ -1.15
VPS11-204ENST00000530809 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
VPS11-204ENST00000530809 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
VPS11-204ENST00000530809 NRKQ7Z2Y5 1582 aa7.88□□□□□ -1.15
VPS11-204ENST00000530809 KIAA0232Q92628 1395 aa7.88□□□□□ -1.15
VPS11-204ENST00000530809 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
VPS11-204ENST00000530809 SAFB2Q14151 953 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS11-204ENST00000530809 PEAK1Q9H792 1746 aa7.88□□□□□ -1.15
VPS11-204ENST00000530809 SSH2Q76I76 1423 aa7.87□□□□□ -1.15
VPS11-204ENST00000530809 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
VPS11-204ENST00000530809 MYOM1P52179 1685 aa7.87□□□□□ -1.15
VPS11-204ENST00000530809 PAK3O75914 559 aaPredicted RBP7.87□□□□□ -1.15
VPS11-204ENST00000530809 CFAP70Q5T0N1 1121 aa7.87□□□□□ -1.15
VPS11-204ENST00000530809 NGDNQ8NEJ9 315 aaKnown RBP7.87□□□□□ -1.15
VPS11-204ENST00000530809 THRAP3Q9Y2W1 955 aaKnown RBP7.87□□□□□ -1.15
VPS11-204ENST00000530809 LRRC37A3O60309 1634 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 MPHOSPH9Q99550 1183 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 OVOS2A0A0G2JMS6 1433 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 OVOS2A0A0J9YW53 1432 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 OVOS2Q6IE36 1432 aa7.86□□□□□ -1.15
VPS11-204ENST00000530809 PRR36Q9H6K5 1346 aa7.85□□□□□ -1.15
VPS11-204ENST00000530809 WASLO00401 505 aaPredicted RBP7.85□□□□□ -1.15
VPS11-204ENST00000530809 EVA1CP58658 441 aa7.85□□□□□ -1.15
VPS11-204ENST00000530809 PPARGC1BQ86YN6 1023 aaKnown RBP7.85□□□□□ -1.15
VPS11-204ENST00000530809 TCP11L2Q8N4U5 519 aa7.85□□□□□ -1.15
VPS11-204ENST00000530809 CPDO75976 1380 aa7.84□□□□□ -1.15
VPS11-204ENST00000530809 MINK1Q8N4C8 1332 aaPredicted RBP7.84□□□□□ -1.15
VPS11-204ENST00000530809 PLSCR1O15162 318 aa7.84□□□□□ -1.15
VPS11-204ENST00000530809 MYCNP04198 464 aaPredicted RBP7.84□□□□□ -1.15
VPS11-204ENST00000530809 CHRNA2Q15822 529 aa7.84□□□□□ -1.15
VPS11-204ENST00000530809 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
VPS11-204ENST00000530809 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
VPS11-204ENST00000530809 USP35Q9P2H5 1018 aa7.84□□□□□ -1.15
VPS11-204ENST00000530809 POLR3AO14802 1390 aaPredicted RBP7.84□□□□□ -1.16
VPS11-204ENST00000530809 ZC3H6P61129 1189 aaKnown RBP7.83□□□□□ -1.16
VPS11-204ENST00000530809 STAC3Q96MF2 364 aa7.83□□□□□ -1.16
VPS11-204ENST00000530809 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
VPS11-204ENST00000530809 CRB1P82279 1406 aa7.83□□□□□ -1.16
VPS11-204ENST00000530809 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
VPS11-204ENST00000530809 COL5A2P05997 1499 aaPredicted RBP7.82□□□□□ -1.16
VPS11-204ENST00000530809 ZNF784Q8NCA9 323 aaPredicted RBP7.82□□□□□ -1.16
VPS11-204ENST00000530809 USP19O94966 1318 aa7.81□□□□□ -1.16
VPS11-204ENST00000530809 BCL9O00512 1426 aa7.81□□□□□ -1.16
VPS11-204ENST00000530809 LARP1Q6PKG0 1096 aaKnown RBP7.81□□□□□ -1.16
VPS11-204ENST00000530809 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
VPS11-204ENST00000530809 RGPD5Q99666 1765 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms