RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 KLHL40Q2TBA0 621 aa14.68□□□□□ -0.06
TRIM3-210ENST00000530724 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
TRIM3-210ENST00000530724 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
TRIM3-210ENST00000530724 ZMYND15Q9H091 742 aa14.68□□□□□ -0.06
TRIM3-210ENST00000530724 ZBTB40Q9NUA8 1239 aa14.68□□□□□ -0.06
TRIM3-210ENST00000530724 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
TRIM3-210ENST00000530724 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
TRIM3-210ENST00000530724 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 ANKRD36BQ8N2N9 1353 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-210ENST00000530724 MTERF4Q7Z6M4 381 aaKnown RBP14.66□□□□□ -0.06
TRIM3-210ENST00000530724 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
TRIM3-210ENST00000530724 TRIM44Q96DX7 344 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-210ENST00000530724 KIF24Q5T7B8 1368 aa14.65□□□□□ -0.06
TRIM3-210ENST00000530724 IPO8O15397 1037 aaKnown RBP14.65□□□□□ -0.06
TRIM3-210ENST00000530724 ZNF500O60304 480 aaPredicted RBP14.65□□□□□ -0.06
TRIM3-210ENST00000530724 PDLIM2Q96JY6 352 aa14.65□□□□□ -0.06
TRIM3-210ENST00000530724 KIF2CQ99661 725 aa14.65□□□□□ -0.06
TRIM3-210ENST00000530724 TRIM27P14373 513 aa14.64□□□□□ -0.07
TRIM3-210ENST00000530724 GAS2L3Q86XJ1 694 aa14.64□□□□□ -0.07
TRIM3-210ENST00000530724 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
TRIM3-210ENST00000530724 SPAG9O60271 1321 aaKnown RBP14.64□□□□□ -0.07
TRIM3-210ENST00000530724 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
TRIM3-210ENST00000530724 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
TRIM3-210ENST00000530724 GOLGA6L22H0YM25 854 aa14.62□□□□□ -0.07
TRIM3-210ENST00000530724 K7ELQ4 463 aaPredicted RBP14.62□□□□□ -0.07
TRIM3-210ENST00000530724 MFAP1P55081 439 aaKnown RBP14.62□□□□□ -0.07
TRIM3-210ENST00000530724 FTSJ3Q8IY81 847 aaKnown RBP14.62□□□□□ -0.07
TRIM3-210ENST00000530724 PLEKHF1Q96S99 279 aa14.62□□□□□ -0.07
TRIM3-210ENST00000530724 C14orf93Q9H972 538 aaKnown RBP14.62□□□□□ -0.07
TRIM3-210ENST00000530724 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
TRIM3-210ENST00000530724 PTCH1Q13635 1447 aa14.61□□□□□ -0.07
TRIM3-210ENST00000530724 CYP2E1P05181 493 aaPredicted RBP14.61□□□□□ -0.07
TRIM3-210ENST00000530724 TNNQ9UQP3 1299 aa14.61□□□□□ -0.07
TRIM3-210ENST00000530724 KIF1BO60333 1816 aa14.61□□□□□ -0.07
TRIM3-210ENST00000530724 CD109Q6YHK3 1445 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 ABCA9Q8IUA7 1624 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 CFAP70Q5T0N1 1121 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 GZF1Q9H116 711 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-210ENST00000530724 NOL7Q9UMY1 257 aaKnown RBP14.6□□□□□ -0.07
TRIM3-210ENST00000530724 ADGRF5Q8IZF2 1346 aa14.6□□□□□ -0.07
TRIM3-210ENST00000530724 QRICH2Q9H0J4 1663 aa14.59□□□□□ -0.07
TRIM3-210ENST00000530724 NUCB2P80303 420 aa14.59□□□□□ -0.07
TRIM3-210ENST00000530724 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
TRIM3-210ENST00000530724 HSP90AB1P08238 724 aaKnown RBP14.58□□□□□ -0.08
TRIM3-210ENST00000530724 NASPP49321 788 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-210ENST00000530724 MTHFSP49914 203 aa14.58□□□□□ -0.08
TRIM3-210ENST00000530724 CSPP1Q1MSJ5 1256 aa14.58□□□□□ -0.08
TRIM3-210ENST00000530724 SSH1Q8WYL5 1049 aa14.58□□□□□ -0.08
TRIM3-210ENST00000530724 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
TRIM3-210ENST00000530724 ZFYVE9O95405 1425 aa14.58□□□□□ -0.08
TRIM3-210ENST00000530724 RABEP1Q15276 862 aa14.57□□□□□ -0.08
TRIM3-210ENST00000530724 SMC4Q9NTJ3 1288 aa14.57□□□□□ -0.08
TRIM3-210ENST00000530724 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
TRIM3-210ENST00000530724 ZCCHC11Q5TAX3 1644 aaKnown RBP14.56□□□□□ -0.08
TRIM3-210ENST00000530724 TMPOP42166 694 aaKnown RBP14.56□□□□□ -0.08
TRIM3-210ENST00000530724 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
TRIM3-210ENST00000530724 TULP4Q9NRJ4 1543 aa14.56□□□□□ -0.08
TRIM3-210ENST00000530724 PPLO60437 1756 aa14.55□□□□□ -0.08
TRIM3-210ENST00000530724 BAG4O95429 457 aaKnown RBP14.55□□□□□ -0.08
TRIM3-210ENST00000530724 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
TRIM3-210ENST00000530724 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
TRIM3-210ENST00000530724 RIPK4P57078 832 aa14.54□□□□□ -0.08
TRIM3-210ENST00000530724 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
TRIM3-210ENST00000530724 ANKRD26Q9UPS8 1709 aa14.54□□□□□ -0.08
TRIM3-210ENST00000530724 ABCC3O15438 1527 aa14.53□□□□□ -0.08
TRIM3-210ENST00000530724 TMEM57Q8N5G2 664 aa14.53□□□□□ -0.08
TRIM3-210ENST00000530724 PIK3C2BO00750 1634 aa14.52□□□□□ -0.08
TRIM3-210ENST00000530724 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
TRIM3-210ENST00000530724 CDC45O75419 566 aa14.52□□□□□ -0.09
TRIM3-210ENST00000530724 IL17RAQ96F46 866 aa14.52□□□□□ -0.09
TRIM3-210ENST00000530724 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.09
TRIM3-210ENST00000530724 ABCC4O15439 1325 aa14.51□□□□□ -0.09
TRIM3-210ENST00000530724 ZBTB7BO15156 539 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-210ENST00000530724 MSNP26038 577 aaKnown RBP14.51□□□□□ -0.09
TRIM3-210ENST00000530724 FBLN2P98095 1184 aa14.51□□□□□ -0.09
TRIM3-210ENST00000530724 TBC1D9Q6ZT07 1266 aa14.51□□□□□ -0.09
TRIM3-210ENST00000530724 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
TRIM3-210ENST00000530724 SMAP1Q8IYB5 467 aaPredicted RBP14.51□□□□□ -0.09
TRIM3-210ENST00000530724 NOB1Q9ULX3 412 aaKnown RBP14.51□□□□□ -0.09
TRIM3-210ENST00000530724 CLTCQ00610 1675 aaKnown RBP14.51□□□□□ -0.09
TRIM3-210ENST00000530724 BCL2L13Q9BXK5 485 aa14.5□□□□□ -0.09
TRIM3-210ENST00000530724 SLC12A5Q9H2X9 1139 aa14.5□□□□□ -0.09
TRIM3-210ENST00000530724 LMBRD1Q9NUN5 540 aa14.5□□□□□ -0.09
TRIM3-210ENST00000530724 ZKSCAN5Q9Y2L8 839 aa14.5□□□□□ -0.09
TRIM3-210ENST00000530724 FRMPD1Q5SYB0 1578 aa14.5□□□□□ -0.09
TRIM3-210ENST00000530724 GLI2P10070 1586 aa14.49□□□□□ -0.09
TRIM3-210ENST00000530724 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
TRIM3-210ENST00000530724 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM3-210ENST00000530724 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
TRIM3-210ENST00000530724 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
TRIM3-210ENST00000530724 UGGT1Q9NYU2 1555 aa14.48□□□□□ -0.09
TRIM3-210ENST00000530724 FCHSD2O94868 740 aa14.48□□□□□ -0.09
TRIM3-210ENST00000530724 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
TRIM3-210ENST00000530724 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms