RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 GOLGA3Q08378 1498 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 ZPR1O75312 459 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
LINC00534-203ENST00000523406 SPSB2Q99619 263 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
LINC00534-203ENST00000523406 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 KIF27Q86VH2 1401 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 JUNDP17535 347 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 PRM3Q9NNZ6 103 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
LINC00534-203ENST00000523406 GPR37L1O60883 481 aa10.09□□□□□ -0.79
LINC00534-203ENST00000523406 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
LINC00534-203ENST00000523406 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
LINC00534-203ENST00000523406 TLL1O43897 1013 aa10.08□□□□□ -0.8
LINC00534-203ENST00000523406 EPS8L1Q8TE68 723 aa10.08□□□□□ -0.8
LINC00534-203ENST00000523406 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
LINC00534-203ENST00000523406 DXOO77932 396 aaKnown RBP10.07□□□□□ -0.8
LINC00534-203ENST00000523406 ADH1BP00325 375 aa10.07□□□□□ -0.8
LINC00534-203ENST00000523406 MMP16P51512 607 aa10.07□□□□□ -0.8
LINC00534-203ENST00000523406 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
LINC00534-203ENST00000523406 ABL2P42684 1182 aa10.06□□□□□ -0.8
LINC00534-203ENST00000523406 NR6A1Q15406 480 aa10.06□□□□□ -0.8
LINC00534-203ENST00000523406 PTPRNQ16849 979 aa10.06□□□□□ -0.8
LINC00534-203ENST00000523406 PCGF6Q9BYE7 350 aa10.06□□□□□ -0.8
LINC00534-203ENST00000523406 FGD5Q6ZNL6 1462 aa10.05□□□□□ -0.8
LINC00534-203ENST00000523406 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-203ENST00000523406 IRF5Q13568 498 aa10.05□□□□□ -0.8
LINC00534-203ENST00000523406 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
LINC00534-203ENST00000523406 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
LINC00534-203ENST00000523406 CEP162Q5TB80 1403 aa10.05□□□□□ -0.8
LINC00534-203ENST00000523406 CUX2O14529 1486 aa10.04□□□□□ -0.8
LINC00534-203ENST00000523406 KIF21BO75037 1637 aa10.04□□□□□ -0.8
LINC00534-203ENST00000523406 ARID3CA6NKF2 412 aa10.04□□□□□ -0.8
LINC00534-203ENST00000523406 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
LINC00534-203ENST00000523406 DNMBPQ6XZF7 1577 aa10.04□□□□□ -0.8
LINC00534-203ENST00000523406 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
LINC00534-203ENST00000523406 TRIM26Q12899 539 aaPredicted RBP10.02□□□□□ -0.81
LINC00534-203ENST00000523406 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.81
LINC00534-203ENST00000523406 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
LINC00534-203ENST00000523406 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
LINC00534-203ENST00000523406 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
LINC00534-203ENST00000523406 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
LINC00534-203ENST00000523406 CCNYL3P0C7X3 344 aa10□□□□□ -0.81
LINC00534-203ENST00000523406 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
LINC00534-203ENST00000523406 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
LINC00534-203ENST00000523406 NUDT12Q9BQG2 462 aa10□□□□□ -0.81
LINC00534-203ENST00000523406 SLC6A16Q9GZN6 736 aa10□□□□□ -0.81
LINC00534-203ENST00000523406 EVA1BQ9NVM1 165 aa10□□□□□ -0.81
LINC00534-203ENST00000523406 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
LINC00534-203ENST00000523406 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
LINC00534-203ENST00000523406 IGF1RP08069 1367 aa9.99□□□□□ -0.81
LINC00534-203ENST00000523406 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
LINC00534-203ENST00000523406 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
LINC00534-203ENST00000523406 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
LINC00534-203ENST00000523406 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
LINC00534-203ENST00000523406 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
LINC00534-203ENST00000523406 CLIP1P30622 1438 aa9.98□□□□□ -0.81
LINC00534-203ENST00000523406 RAD54L2Q9Y4B4 1467 aa9.98□□□□□ -0.81
LINC00534-203ENST00000523406 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
LINC00534-203ENST00000523406 POM121CA8CG34 1229 aa9.97□□□□□ -0.81
LINC00534-203ENST00000523406 CTHP32929 405 aa9.97□□□□□ -0.81
LINC00534-203ENST00000523406 PNMA1Q8ND90 353 aa9.97□□□□□ -0.81
LINC00534-203ENST00000523406 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
LINC00534-203ENST00000523406 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
LINC00534-203ENST00000523406 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.82
LINC00534-203ENST00000523406 S1PR4O95977 384 aa9.95□□□□□ -0.82
LINC00534-203ENST00000523406 KCNC4Q03721 635 aa9.95□□□□□ -0.82
LINC00534-203ENST00000523406 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
LINC00534-203ENST00000523406 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
LINC00534-203ENST00000523406 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
LINC00534-203ENST00000523406 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
LINC00534-203ENST00000523406 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
LINC00534-203ENST00000523406 PTCRAQ6ISU1 281 aaPredicted RBP9.93□□□□□ -0.82
LINC00534-203ENST00000523406 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
LINC00534-203ENST00000523406 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
LINC00534-203ENST00000523406 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
LINC00534-203ENST00000523406 ARMC2Q8NEN0 867 aa9.92□□□□□ -0.82
LINC00534-203ENST00000523406 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
LINC00534-203ENST00000523406 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
LINC00534-203ENST00000523406 ADAMTS19Q8TE59 1207 aa9.91□□□□□ -0.82
LINC00534-203ENST00000523406 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
LINC00534-203ENST00000523406 GLMNQ92990 594 aa9.91□□□□□ -0.82
LINC00534-203ENST00000523406 UNC93B1Q9H1C4 597 aa9.91□□□□□ -0.82
LINC00534-203ENST00000523406 NR1H3Q13133 447 aa9.9□□□□□ -0.82
LINC00534-203ENST00000523406 FCF1Q9Y324 198 aaKnown RBP9.9□□□□□ -0.82
LINC00534-203ENST00000523406 ZBBXA8MT70 800 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 FBXO45P0C2W1 286 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 ARID3AQ99856 593 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 ALG2Q9H553 416 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 SERPINA10Q9UK55 444 aa9.89□□□□□ -0.83
LINC00534-203ENST00000523406 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 SOX11P35716 441 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 HDGFL1Q5TGJ6 251 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 NBPF14Q5TI25 921 aa9.88□□□□□ -0.83
LINC00534-203ENST00000523406 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms