RNA–Protein interactions for RNA: ENST00000522073.5

TTC1-204, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 2

Gene TTC1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-204ENST00000522073 TRIM32Q13049 653 aa12.4□□□□□ -0.42
TTC1-204ENST00000522073 RUSC2Q8N2Y8 1516 aa12.39□□□□□ -0.43
TTC1-204ENST00000522073 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
TTC1-204ENST00000522073 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
TTC1-204ENST00000522073 SMPD1P17405 629 aa12.38□□□□□ -0.43
TTC1-204ENST00000522073 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
TTC1-204ENST00000522073 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
TTC1-204ENST00000522073 CUL7Q14999 1698 aa12.38□□□□□ -0.43
TTC1-204ENST00000522073 KDM4AO75164 1064 aa12.37□□□□□ -0.43
TTC1-204ENST00000522073 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
TTC1-204ENST00000522073 DXOO77932 396 aaKnown RBP12.36□□□□□ -0.43
TTC1-204ENST00000522073 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
TTC1-204ENST00000522073 IRF6O14896 467 aa12.35□□□□□ -0.43
TTC1-204ENST00000522073 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
TTC1-204ENST00000522073 HLA-CQ95604 372 aa12.33□□□□□ -0.44
TTC1-204ENST00000522073 CARMIL2Q6F5E8 1435 aa12.33□□□□□ -0.44
TTC1-204ENST00000522073 PTPRGP23470 1445 aa12.32□□□□□ -0.44
TTC1-204ENST00000522073 J3QL48 77 aa12.32□□□□□ -0.44
TTC1-204ENST00000522073 WFS1O76024 890 aa12.32□□□□□ -0.44
TTC1-204ENST00000522073 USP46P62068 366 aa12.32□□□□□ -0.44
TTC1-204ENST00000522073 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
TTC1-204ENST00000522073 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
TTC1-204ENST00000522073 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
TTC1-204ENST00000522073 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
TTC1-204ENST00000522073 HOXA2O43364 376 aa12.29□□□□□ -0.44
TTC1-204ENST00000522073 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
TTC1-204ENST00000522073 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
TTC1-204ENST00000522073 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
TTC1-204ENST00000522073 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
TTC1-204ENST00000522073 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
TTC1-204ENST00000522073 IQGAP2Q13576 1575 aa12.27□□□□□ -0.44
TTC1-204ENST00000522073 SKOR1P84550 965 aa12.27□□□□□ -0.45
TTC1-204ENST00000522073 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
TTC1-204ENST00000522073 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
TTC1-204ENST00000522073 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.45
TTC1-204ENST00000522073 HPS1Q92902 700 aa12.26□□□□□ -0.45
TTC1-204ENST00000522073 WNT7BP56706 349 aa12.25□□□□□ -0.45
TTC1-204ENST00000522073 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
TTC1-204ENST00000522073 SNRPBP14678 240 aaKnown RBP12.24□□□□□ -0.45
TTC1-204ENST00000522073 DISP1Q96F81 1524 aa12.23□□□□□ -0.45
TTC1-204ENST00000522073 GUCA2AQ02747 115 aa12.23□□□□□ -0.45
TTC1-204ENST00000522073 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
TTC1-204ENST00000522073 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
TTC1-204ENST00000522073 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
TTC1-204ENST00000522073 JUNDP17535 347 aa12.22□□□□□ -0.45
TTC1-204ENST00000522073 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
TTC1-204ENST00000522073 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
TTC1-204ENST00000522073 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
TTC1-204ENST00000522073 UACAQ9BZF9 1416 aa12.21□□□□□ -0.45
TTC1-204ENST00000522073 WIPF1O43516 503 aa12.21□□□□□ -0.45
TTC1-204ENST00000522073 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.46
TTC1-204ENST00000522073 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
TTC1-204ENST00000522073 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
TTC1-204ENST00000522073 CLCN1P35523 988 aa12.2□□□□□ -0.46
TTC1-204ENST00000522073 ABCC10Q5T3U5 1492 aa12.2□□□□□ -0.46
TTC1-204ENST00000522073 RANGAP1P46060 587 aaPredicted RBP12.19□□□□□ -0.46
TTC1-204ENST00000522073 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
TTC1-204ENST00000522073 EEA1Q15075 1411 aa12.19□□□□□ -0.46
TTC1-204ENST00000522073 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
TTC1-204ENST00000522073 LCE2CQ5TA81 110 aa12.18□□□□□ -0.46
TTC1-204ENST00000522073 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
TTC1-204ENST00000522073 GOLGA3Q08378 1498 aa12.17□□□□□ -0.46
TTC1-204ENST00000522073 PTCRAQ6ISU1 281 aaPredicted RBP12.17□□□□□ -0.46
TTC1-204ENST00000522073 RETREG3Q86VR2 466 aa12.17□□□□□ -0.46
TTC1-204ENST00000522073 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
TTC1-204ENST00000522073 SIAH2O43255 324 aa12.16□□□□□ -0.46
TTC1-204ENST00000522073 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
TTC1-204ENST00000522073 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
TTC1-204ENST00000522073 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
TTC1-204ENST00000522073 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
TTC1-204ENST00000522073 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
TTC1-204ENST00000522073 UHRF1BP1LA0JNW5 1464 aa12.15□□□□□ -0.46
TTC1-204ENST00000522073 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
TTC1-204ENST00000522073 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
TTC1-204ENST00000522073 INSM1Q01101 510 aaPredicted RBP12.13□□□□□ -0.47
TTC1-204ENST00000522073 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
TTC1-204ENST00000522073 PLB1Q6P1J6 1458 aa12.13□□□□□ -0.47
TTC1-204ENST00000522073 FDX1P10109 184 aa12.11□□□□□ -0.47
TTC1-204ENST00000522073 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
TTC1-204ENST00000522073 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
TTC1-204ENST00000522073 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
TTC1-204ENST00000522073 KDM5BQ9UGL1 1544 aa12.1□□□□□ -0.47
TTC1-204ENST00000522073 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
TTC1-204ENST00000522073 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
TTC1-204ENST00000522073 SH3BP2P78314 561 aa12.08□□□□□ -0.48
TTC1-204ENST00000522073 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
TTC1-204ENST00000522073 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
TTC1-204ENST00000522073 MS4A1P11836 297 aa12.07□□□□□ -0.48
TTC1-204ENST00000522073 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
TTC1-204ENST00000522073 SPIRE2Q8WWL2 714 aa12.06□□□□□ -0.48
TTC1-204ENST00000522073 WASF2Q9Y6W5 498 aa12.06□□□□□ -0.48
TTC1-204ENST00000522073 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
TTC1-204ENST00000522073 CAPN5O15484 640 aaPredicted RBP12.05□□□□□ -0.48
TTC1-204ENST00000522073 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
TTC1-204ENST00000522073 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
TTC1-204ENST00000522073 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
TTC1-204ENST00000522073 WDR7Q9Y4E6 1490 aa12.05□□□□□ -0.48
TTC1-204ENST00000522073 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
TTC1-204ENST00000522073 CTTNBP2Q8WZ74 1663 aa12.04□□□□□ -0.48
TTC1-204ENST00000522073 PTPRNQ16849 979 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms