RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
HMBOX1-208ENST00000521516 TECPR2O15040 1411 aa11.91□□□□□ -0.5
HMBOX1-208ENST00000521516 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
HMBOX1-208ENST00000521516 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
HMBOX1-208ENST00000521516 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
HMBOX1-208ENST00000521516 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-208ENST00000521516 PLSCR1O15162 318 aa11.9□□□□□ -0.51
HMBOX1-208ENST00000521516 PDE3BQ13370 1112 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 NUP155O75694 1391 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
HMBOX1-208ENST00000521516 MTFR1LQ9H019 292 aa11.87□□□□□ -0.51
HMBOX1-208ENST00000521516 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
HMBOX1-208ENST00000521516 GPR162Q16538 588 aa11.86□□□□□ -0.51
HMBOX1-208ENST00000521516 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 ARXQ96QS3 562 aa11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 ALS2Q96Q42 1657 aa11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
HMBOX1-208ENST00000521516 PRELPP51888 382 aa11.84□□□□□ -0.51
HMBOX1-208ENST00000521516 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
HMBOX1-208ENST00000521516 PROM2Q8N271 834 aa11.84□□□□□ -0.51
HMBOX1-208ENST00000521516 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
HMBOX1-208ENST00000521516 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
HMBOX1-208ENST00000521516 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
HMBOX1-208ENST00000521516 KIF1BO60333 1816 aa11.83□□□□□ -0.52
HMBOX1-208ENST00000521516 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
HMBOX1-208ENST00000521516 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
HMBOX1-208ENST00000521516 KNDC1Q76NI1 1749 aa11.82□□□□□ -0.52
HMBOX1-208ENST00000521516 ATP10DQ9P241 1426 aa11.81□□□□□ -0.52
HMBOX1-208ENST00000521516 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
HMBOX1-208ENST00000521516 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
HMBOX1-208ENST00000521516 CAPN15O75808 1086 aa11.81□□□□□ -0.52
HMBOX1-208ENST00000521516 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 STRN4Q9NRL3 753 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 STK26Q9P289 416 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 OVOS2A0A0G2JMS6 1433 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 OVOS2A0A0J9YW53 1432 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 OVOS2Q6IE36 1432 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
HMBOX1-208ENST00000521516 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 PARP4Q9UKK3 1724 aaKnown RBP11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 PPLO60437 1756 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 USP35Q9P2H5 1018 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
HMBOX1-208ENST00000521516 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
HMBOX1-208ENST00000521516 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
HMBOX1-208ENST00000521516 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
HMBOX1-208ENST00000521516 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
HMBOX1-208ENST00000521516 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
HMBOX1-208ENST00000521516 APLP1P51693 650 aa11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 ATP7BP35670 1465 aa11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 ADCY9O60503 1353 aa11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
HMBOX1-208ENST00000521516 AATKQ6ZMQ8 1374 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 TXNRD1Q16881 649 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 BCL9O00512 1426 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 LARP1Q6PKG0 1096 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
HMBOX1-208ENST00000521516 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
HMBOX1-208ENST00000521516 EVA1CP58658 441 aa11.74□□□□□ -0.53
HMBOX1-208ENST00000521516 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
HMBOX1-208ENST00000521516 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.533e-9■■■□□ 15.5
HMBOX1-208ENST00000521516 ADGRF5Q8IZF2 1346 aa11.73□□□□□ -0.53
HMBOX1-208ENST00000521516 TMEM132EQ6IEE7 984 aa11.72□□□□□ -0.53
HMBOX1-208ENST00000521516 PHRF1Q9P1Y6 1649 aaKnown RBP11.72□□□□□ -0.53
HMBOX1-208ENST00000521516 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
HMBOX1-208ENST00000521516 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
HMBOX1-208ENST00000521516 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.54
HMBOX1-208ENST00000521516 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
HMBOX1-208ENST00000521516 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
HMBOX1-208ENST00000521516 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-208ENST00000521516 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
HMBOX1-208ENST00000521516 KIF3CO14782 793 aa11.7□□□□□ -0.54
HMBOX1-208ENST00000521516 CPDO75976 1380 aa11.68□□□□□ -0.54
HMBOX1-208ENST00000521516 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
HMBOX1-208ENST00000521516 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 POLD1P28340 1107 aa11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 APLP2Q06481 763 aa11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 DDB1Q16531 1140 aa11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
HMBOX1-208ENST00000521516 PRR36Q9H6K5 1346 aa11.66□□□□□ -0.54
HMBOX1-208ENST00000521516 COL5A2P05997 1499 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms