RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 HSPA6P17066 643 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 EVA1CP58658 441 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 WAPLQ7Z5K2 1190 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 NRAPQ86VF7 1730 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 ROCK1Q13464 1354 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 GPRASP1Q5JY77 1395 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
AC055854.1-202ENST00000519624 TECPR2O15040 1411 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 ARXQ96QS3 562 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 STRN4Q9NRL3 753 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 STK32BQ9NY57 414 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 STK26Q9P289 416 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 ATF5Q9Y2D1 282 aaPredicted RBP7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 THRAP3Q9Y2W1 955 aaKnown RBP7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 MAP3K5Q99683 1374 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 NRXN1Q9ULB1 1477 aa7.53□□□□□ -1.2
AC055854.1-202ENST00000519624 ABCC11Q96J66 1382 aa7.52□□□□□ -1.21
AC055854.1-202ENST00000519624 GRIN3BO60391 1043 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 TCP11L2Q8N4U5 519 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 SIRT1Q96EB6 747 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 ANO8Q9HCE9 1232 aaPredicted RBP7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
AC055854.1-202ENST00000519624 ABCA3Q99758 1704 aa7.5□□□□□ -1.21
AC055854.1-202ENST00000519624 SLC15A2Q16348 729 aa7.5□□□□□ -1.21
AC055854.1-202ENST00000519624 PELP1Q8IZL8 1130 aaKnown RBP7.5□□□□□ -1.21
AC055854.1-202ENST00000519624 GPBP1L1Q9HC44 474 aaPredicted RBP7.5□□□□□ -1.21
AC055854.1-202ENST00000519624 MYOM1P52179 1685 aa7.5□□□□□ -1.21
AC055854.1-202ENST00000519624 FMN2Q9NZ56 1722 aa7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 DHX57Q6P158 1386 aaKnown RBP7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 PAK3O75914 559 aaPredicted RBP7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 PMFBP1Q8TBY8 1022 aa7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 ANKARQ7Z5J8 1434 aa7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 CLTCL1P53675 1640 aa7.49□□□□□ -1.21
AC055854.1-202ENST00000519624 CASZ1Q86V15 1759 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 CHD4Q14839 1912 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 EIF3AQ14152 1382 aaKnown RBP7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 KIAA0232Q92628 1395 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 POLD1P28340 1107 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 APLP1P51693 650 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 SGIP1Q9BQI5 828 aa7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 PDGFDQ9GZP0 370 aaPredicted RBP7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 ACIN1Q9UKV3 1341 aaKnown RBP7.48□□□□□ -1.21
AC055854.1-202ENST00000519624 PLEKHH1Q9ULM0 1364 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 SSH2Q76I76 1423 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 RGPD3A6NKT7 1758 aaPredicted RBP7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 RGPD4Q7Z3J3 1758 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 CAPN15O75808 1086 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 PRELPP51888 382 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 CHRNA2Q15822 529 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 NGDNQ8NEJ9 315 aaKnown RBP7.47□□□□□ -1.21
AC055854.1-202ENST00000519624 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.21
AC055854.1-202ENST00000519624 YTHDC2Q9H6S0 1430 aaKnown RBP7.46□□□□□ -1.21
AC055854.1-202ENST00000519624 KIF1BO60333 1816 aa7.46□□□□□ -1.21
AC055854.1-202ENST00000519624 DDB1Q16531 1140 aa7.46□□□□□ -1.22
AC055854.1-202ENST00000519624 PCDH10Q9P2E7 1040 aa7.46□□□□□ -1.22
AC055854.1-202ENST00000519624 SLC34A2O95436 690 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 ZC3H6P61129 1189 aaKnown RBP7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 TMEM132EQ6IEE7 984 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 POGKQ9P215 609 aa7.45□□□□□ -1.22
AC055854.1-202ENST00000519624 ATP10DQ9P241 1426 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 PROM2Q8N271 834 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 ADGRF5Q8IZF2 1346 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 AATKQ6ZMQ8 1374 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 KNDC1Q76NI1 1749 aa7.44□□□□□ -1.22
AC055854.1-202ENST00000519624 PRAM1Q96QH2 718 aa7.43□□□□□ -1.22
AC055854.1-202ENST00000519624 BCL9O00512 1426 aa7.43□□□□□ -1.22
AC055854.1-202ENST00000519624 ATP7BP35670 1465 aa7.43□□□□□ -1.22
AC055854.1-202ENST00000519624 ALS2Q96Q42 1657 aa7.42□□□□□ -1.22
AC055854.1-202ENST00000519624 SAFB2Q14151 953 aaKnown RBP eCLIP7.42□□□□□ -1.22
AC055854.1-202ENST00000519624 COL13A1Q5TAT6 717 aaPredicted RBP7.42□□□□□ -1.22
AC055854.1-202ENST00000519624 CRB1P82279 1406 aa7.42□□□□□ -1.22
AC055854.1-202ENST00000519624 TRPM3Q9HCF6 1732 aaPredicted RBP7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 IFT172Q9UG01 1749 aa7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 ITGAEP38570 1179 aa7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 ZNF526Q8TF50 670 aaPredicted RBP7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 CPDO75976 1380 aa7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 PIK3C2GO75747 1445 aa7.41□□□□□ -1.22
AC055854.1-202ENST00000519624 RGL3Q3MIN7 710 aa7.4□□□□□ -1.22
AC055854.1-202ENST00000519624 PARP4Q9UKK3 1724 aaKnown RBP7.4□□□□□ -1.23
AC055854.1-202ENST00000519624 PPLO60437 1756 aa7.4□□□□□ -1.23
AC055854.1-202ENST00000519624 COL5A2P05997 1499 aaPredicted RBP7.39□□□□□ -1.23
AC055854.1-202ENST00000519624 TOM1L2Q6ZVM7 507 aa7.39□□□□□ -1.23
AC055854.1-202ENST00000519624 DNAJC5GQ8N7S2 189 aa7.39□□□□□ -1.23
AC055854.1-202ENST00000519624 SLC4A1APQ9BWU0 796 aaKnown RBP7.39□□□□□ -1.23
AC055854.1-202ENST00000519624 C14orf93Q9H972 538 aaKnown RBP7.39□□□□□ -1.23
AC055854.1-202ENST00000519624 TULP4Q9NRJ4 1543 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 WASLO00401 505 aaPredicted RBP7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 EXOC5O00471 708 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 TOMM70O94826 608 aa7.38□□□□□ -1.23
AC055854.1-202ENST00000519624 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms