RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-212ENST00000518919 SYNJ1O43426 1573 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 WRNQ14191 1432 aaPredicted RBP eCLIP7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 FBXO45P0C2W1 286 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 RNF19BQ6ZMZ0 732 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 FAM9AQ8IZU1 332 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
CTNNA1-212ENST00000518919 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
CTNNA1-212ENST00000518919 BHMG1C9JSJ3 638 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-212ENST00000518919 BLOC1S3Q6QNY0 202 aa7.55□□□□□ -1.2
CTNNA1-212ENST00000518919 USB1Q9BQ65 265 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-212ENST00000518919 FKBPLQ9UIM3 349 aa7.55□□□□□ -1.2
CTNNA1-212ENST00000518919 TK2O00142 265 aa7.54□□□□□ -1.2
CTNNA1-212ENST00000518919 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
CTNNA1-212ENST00000518919 VRTNQ9H8Y1 702 aa7.54□□□□□ -1.2
CTNNA1-212ENST00000518919 ZC3H4Q9UPT8 1303 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-212ENST00000518919 SOGA1O94964 1423 aa7.53□□□□□ -1.2
CTNNA1-212ENST00000518919 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
CTNNA1-212ENST00000518919 OTUD5Q96G74 571 aa7.53□□□□□ -1.2
CTNNA1-212ENST00000518919 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
CTNNA1-212ENST00000518919 FAM205CA6NFA0 338 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 F12P00748 615 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 JUNDP17535 347 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 B4GALNT3Q6L9W6 998 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 ANKK1Q8NFD2 765 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 MARVELD3Q96A59 401 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 MAP10Q9P2G4 905 aa7.52□□□□□ -1.21
CTNNA1-212ENST00000518919 USP17L3A6NCW0 530 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 USP17L4A6NCW7 530 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 FMNL1O95466 1100 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 PTPRNQ16849 979 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 BRICD5Q6PL45 260 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 USP17L2Q6R6M4 530 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 USP17L1Q7RTZ2 530 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 HPS5Q9UPZ3 1129 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 SALL2Q9Y467 1007 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 CC2D2AQ9P2K1 1620 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 EEA1Q15075 1411 aa7.51□□□□□ -1.21
CTNNA1-212ENST00000518919 CFTRP13569 1480 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 GOLGA8CPA6NN73 597 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 USP17L5A8MUK1 530 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 ST18O60284 1047 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 NR1I2O75469 434 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 SKIP12755 728 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 CTHP32929 405 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 PPP4CP60510 307 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 FOXD4L5Q5VV16 416 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 ADGRD1Q6QNK2 874 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 FOXD4L4Q8WXT5 416 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 PCDHB3Q9Y5E6 796 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 RUSC2Q8N2Y8 1516 aa7.5□□□□□ -1.21
CTNNA1-212ENST00000518919 APLP1P51693 650 aa7.49□□□□□ -1.21
CTNNA1-212ENST00000518919 TOP2BQ02880 1626 aa7.49□□□□□ -1.21
CTNNA1-212ENST00000518919 BIVM-ERCC5R4GMW8 1640 aa7.49□□□□□ -1.21
CTNNA1-212ENST00000518919 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 ELOAQ14241 798 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 CCDC27Q2M243 656 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 KANK4Q5T7N3 995 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 PLEKHM2Q8IWE5 1019 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 SCUBE3Q8IX30 993 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 THAP11Q96EK4 314 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 STAC3Q96MF2 364 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 ZMIZ1Q9ULJ6 1067 aa7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 NOVA2Q9UNW9 492 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-212ENST00000518919 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 CCNYL3P0C7X3 344 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 BCAMP50895 628 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 TMEM164Q5U3C3 297 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 STK32AQ8WU08 396 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 CUX1P39880 1505 aa7.47□□□□□ -1.21
CTNNA1-212ENST00000518919 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 PTK2Q05397 1052 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 ARMC2Q8NEN0 867 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 HS3ST6Q96QI5 342 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 TSR3Q9UJK0 312 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L10C9JJH3 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L12C9JPN9 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L21D6R901 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms