RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PPLO60437 1756 aa13.27□□□□□ -0.28
PVT1-207ENST00000518528 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
PVT1-207ENST00000518528 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
PVT1-207ENST00000518528 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
PVT1-207ENST00000518528 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
PVT1-207ENST00000518528 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
PVT1-207ENST00000518528 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
PVT1-207ENST00000518528 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
PVT1-207ENST00000518528 EVA1CP58658 441 aa13.25□□□□□ -0.29
PVT1-207ENST00000518528 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
PVT1-207ENST00000518528 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
PVT1-207ENST00000518528 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
PVT1-207ENST00000518528 C11orf95C9JLR9 678 aaPredicted RBP13.24□□□□□ -0.29
PVT1-207ENST00000518528 KCNQ2O43526 872 aa13.24□□□□□ -0.29
PVT1-207ENST00000518528 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
PVT1-207ENST00000518528 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
PVT1-207ENST00000518528 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
PVT1-207ENST00000518528 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
PVT1-207ENST00000518528 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
PVT1-207ENST00000518528 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
PVT1-207ENST00000518528 USP35Q9P2H5 1018 aa13.21□□□□□ -0.29
PVT1-207ENST00000518528 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
PVT1-207ENST00000518528 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
PVT1-207ENST00000518528 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
PVT1-207ENST00000518528 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
PVT1-207ENST00000518528 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
PVT1-207ENST00000518528 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
PVT1-207ENST00000518528 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
PVT1-207ENST00000518528 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
PVT1-207ENST00000518528 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
PVT1-207ENST00000518528 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
PVT1-207ENST00000518528 ABCA3Q99758 1704 aa13.17□□□□□ -0.3
PVT1-207ENST00000518528 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
PVT1-207ENST00000518528 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
PVT1-207ENST00000518528 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
PVT1-207ENST00000518528 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
PVT1-207ENST00000518528 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
PVT1-207ENST00000518528 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
PVT1-207ENST00000518528 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
PVT1-207ENST00000518528 NUTM2GQ5VZR2 741 aa13.13□□□□□ -0.31
PVT1-207ENST00000518528 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
PVT1-207ENST00000518528 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
PVT1-207ENST00000518528 ATP7BP35670 1465 aa13.12□□□□□ -0.31
PVT1-207ENST00000518528 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
PVT1-207ENST00000518528 PLSCR1O15162 318 aa13.12□□□□□ -0.31
PVT1-207ENST00000518528 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
PVT1-207ENST00000518528 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
PVT1-207ENST00000518528 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
PVT1-207ENST00000518528 RGPD8O14715 1765 aaPredicted RBP13.11□□□□□ -0.31
PVT1-207ENST00000518528 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
PVT1-207ENST00000518528 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
PVT1-207ENST00000518528 CPDO75976 1380 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 OVOS2A0A0G2JMS6 1433 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
PVT1-207ENST00000518528 DDB1Q16531 1140 aa13.08□□□□□ -0.32
PVT1-207ENST00000518528 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
PVT1-207ENST00000518528 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
PVT1-207ENST00000518528 ACEP12821 1306 aa13.08□□□□□ -0.32
PVT1-207ENST00000518528 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
PVT1-207ENST00000518528 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
PVT1-207ENST00000518528 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
PVT1-207ENST00000518528 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
PVT1-207ENST00000518528 GCP02774 474 aa13.06□□□□□ -0.32
PVT1-207ENST00000518528 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
PVT1-207ENST00000518528 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
PVT1-207ENST00000518528 POLR3AO14802 1390 aaPredicted RBP13.06□□□□□ -0.32
PVT1-207ENST00000518528 RREB1Q92766 1687 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 SYT17Q9BSW7 474 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 ADGRB1O14514 1584 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 USP19O94966 1318 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 CRB1P82279 1406 aa13.05□□□□□ -0.32
PVT1-207ENST00000518528 PTGER2P43116 358 aa13.04□□□□□ -0.32
PVT1-207ENST00000518528 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
PVT1-207ENST00000518528 TOM1L2Q6ZVM7 507 aa13.04□□□□□ -0.32
PVT1-207ENST00000518528 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
PVT1-207ENST00000518528 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
PVT1-207ENST00000518528 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
PVT1-207ENST00000518528 SLC15A2Q16348 729 aa13.02□□□□□ -0.33
PVT1-207ENST00000518528 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
PVT1-207ENST00000518528 PDGFDQ9GZP0 370 aaPredicted RBP13.01□□□□□ -0.33
PVT1-207ENST00000518528 BRD4O60885 1362 aaPredicted RBP13.01□□□□□ -0.33
PVT1-207ENST00000518528 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
PVT1-207ENST00000518528 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
PVT1-207ENST00000518528 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
PVT1-207ENST00000518528 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
PVT1-207ENST00000518528 NLRP6P59044 892 aa13□□□□□ -0.33
PVT1-207ENST00000518528 GPR162Q16538 588 aa13□□□□□ -0.33
PVT1-207ENST00000518528 PROM2Q8N271 834 aa13□□□□□ -0.33
PVT1-207ENST00000518528 ARXQ96QS3 562 aa13□□□□□ -0.33
PVT1-207ENST00000518528 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
PVT1-207ENST00000518528 BCL9O00512 1426 aa12.99□□□□□ -0.33
PVT1-207ENST00000518528 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
PVT1-207ENST00000518528 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms