RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 UCN2Q96RP3 112 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 USTQ9Y2C2 406 aa5.99□□□□□ -1.45
CLVS1-202ENST00000518426 SRPK2P78362 688 aaKnown RBP5.98□□□□□ -1.45
CLVS1-202ENST00000518426 LAPTM4BQ86VI4 370 aa5.98□□□□□ -1.45
CLVS1-202ENST00000518426 PNMA1Q8ND90 353 aa5.98□□□□□ -1.45
CLVS1-202ENST00000518426 PATL2C9JE40 543 aaKnown RBP5.97□□□□□ -1.45
CLVS1-202ENST00000518426 BRD1O95696 1058 aa5.97□□□□□ -1.45
CLVS1-202ENST00000518426 MFAP1P55081 439 aaKnown RBP5.97□□□□□ -1.45
CLVS1-202ENST00000518426 MORN1Q5T089 497 aa5.97□□□□□ -1.45
CLVS1-202ENST00000518426 ZFRQ96KR1 1074 aaKnown RBP5.97□□□□□ -1.45
CLVS1-202ENST00000518426 SLC27A5Q9Y2P5 690 aa5.97□□□□□ -1.45
CLVS1-202ENST00000518426 EIF4G2P78344 907 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLVS1-202ENST00000518426 KCNA1Q09470 495 aa5.96□□□□□ -1.46
CLVS1-202ENST00000518426 Q3C1V9 767 aa5.96□□□□□ -1.46
CLVS1-202ENST00000518426 NYAP1Q6ZVC0 841 aa5.96□□□□□ -1.46
CLVS1-202ENST00000518426 MTMR7Q9Y216 660 aa5.96□□□□□ -1.46
CLVS1-202ENST00000518426 MAFBQ9Y5Q3 323 aaPredicted RBP5.96□□□□□ -1.46
CLVS1-202ENST00000518426 BCAMP50895 628 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 DESI1Q6ICB0 168 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 RNF19BQ6ZMZ0 732 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 TBC1D9Q6ZT07 1266 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 RGS22Q8NE09 1264 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 LRCH3Q96II8 777 aa5.95□□□□□ -1.46
CLVS1-202ENST00000518426 ACTN4O43707 911 aaKnown RBP5.94□□□□□ -1.46
CLVS1-202ENST00000518426 ATP9BO43861 1147 aa5.94□□□□□ -1.46
CLVS1-202ENST00000518426 ATG7O95352 703 aa5.94□□□□□ -1.46
CLVS1-202ENST00000518426 NR1H3Q13133 447 aa5.94□□□□□ -1.46
CLVS1-202ENST00000518426 BLOC1S3Q6QNY0 202 aa5.94□□□□□ -1.46
CLVS1-202ENST00000518426 LYPD8Q6UX82 237 aa5.94□□□□□ -1.46
CLVS1-202ENST00000518426 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.94□□□□□ -1.46
CLVS1-202ENST00000518426 FBXO45P0C2W1 286 aa5.93□□□□□ -1.46
CLVS1-202ENST00000518426 USB1Q9BQ65 265 aaKnown RBP5.93□□□□□ -1.46
CLVS1-202ENST00000518426 SOWAHBA6NEL2 793 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 ZBBXA8MT70 800 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 PIK3CDO00329 1044 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 FOXD4L5Q5VV16 416 aaPredicted RBP5.92□□□□□ -1.46
CLVS1-202ENST00000518426 FOXD4L4Q8WXT5 416 aaPredicted RBP5.92□□□□□ -1.46
CLVS1-202ENST00000518426 PRR14Q9BWN1 585 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 PRKD2Q9BZL6 878 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 VRTNQ9H8Y1 702 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 MAP10Q9P2G4 905 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 FKBPLQ9UIM3 349 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 IVNS1ABPQ9Y6Y0 642 aa5.92□□□□□ -1.46
CLVS1-202ENST00000518426 TMEM88BA6NKF7 163 aa5.91□□□□□ -1.46
CLVS1-202ENST00000518426 FMNL1O95466 1100 aaPredicted RBP5.9□□□□□ -1.46
CLVS1-202ENST00000518426 SKIP12755 728 aa5.9□□□□□ -1.46
CLVS1-202ENST00000518426 CTHP32929 405 aa5.9□□□□□ -1.46
CLVS1-202ENST00000518426 BRICD5Q6PL45 260 aa5.9□□□□□ -1.46
CLVS1-202ENST00000518426 WBP1LQ9NX94 342 aa5.9□□□□□ -1.46
CLVS1-202ENST00000518426 USP17L3A6NCW0 530 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L4A6NCW7 530 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 F12P00748 615 aaPredicted RBP5.89□□□□□ -1.47
CLVS1-202ENST00000518426 JUNDP17535 347 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 APLP1P51693 650 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 PPP4CP60510 307 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 KANK4Q5T7N3 995 aaPredicted RBP5.89□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L2Q6R6M4 530 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L1Q7RTZ2 530 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 HPS5Q9UPZ3 1129 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 PCDHB3Q9Y5E6 796 aa5.89□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 NR1I2O75469 434 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 RBM25P49756 843 aaKnown RBP5.88□□□□□ -1.47
CLVS1-202ENST00000518426 PTPRNQ16849 979 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 SCUBE3Q8IX30 993 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 DEPDC4Q8N2C3 294 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 ZMIZ1Q9ULJ6 1067 aa5.88□□□□□ -1.47
CLVS1-202ENST00000518426 SALL2Q9Y467 1007 aaPredicted RBP5.88□□□□□ -1.47
CLVS1-202ENST00000518426 ZC3H4Q9UPT8 1303 aaKnown RBP5.88□□□□□ -1.47
CLVS1-202ENST00000518426 CCDC27Q2M243 656 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 TMEM164Q5U3C3 297 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 SND1Q7KZF4 910 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLVS1-202ENST00000518426 NFATC2IPQ8NCF5 419 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 STK32AQ8WU08 396 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 ZNF428Q96B54 188 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 THAP11Q96EK4 314 aa5.87□□□□□ -1.47
CLVS1-202ENST00000518426 NOVA2Q9UNW9 492 aaKnown RBP5.87□□□□□ -1.47
CLVS1-202ENST00000518426 ELOAQ14241 798 aaKnown RBP5.86□□□□□ -1.47
CLVS1-202ENST00000518426 SLFNL1Q499Z3 407 aa5.86□□□□□ -1.47
CLVS1-202ENST00000518426 B4GALNT3Q6L9W6 998 aa5.86□□□□□ -1.47
CLVS1-202ENST00000518426 PDZRN3Q9UPQ7 1066 aa5.86□□□□□ -1.47
CLVS1-202ENST00000518426 PCDHB9Q9Y5E1 797 aa5.86□□□□□ -1.47
CLVS1-202ENST00000518426 V9GY48 417 aaPredicted RBP5.86□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L15C9J2P7 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L10C9JJH3 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L13C9JLJ4 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L12C9JPN9 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L11C9JVI0 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L21D6R901 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L18D6R9N7 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L22D6RA61 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L17D6RBQ6 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L19D6RCP7 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L20D6RJB6 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 CCNYL3P0C7X3 344 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 USP17L24Q0WX57 530 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 PLEKHM2Q8IWE5 1019 aa5.85□□□□□ -1.47
CLVS1-202ENST00000518426 MKRN1Q9UHC7 482 aaKnown RBP5.85□□□□□ -1.47
CLVS1-202ENST00000518426 TSR3Q9UJK0 312 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms