RNA–Protein interactions for RNA: ENST00000517654.5

FAM49B-202, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-202ENST00000517654 ZNF692Q9BU19 519 aaPredicted RBP22.6■■□□□ 1.21
FAM49B-202ENST00000517654 TTC21BQ7Z4L5 1316 aa22.59■■□□□ 1.21
FAM49B-202ENST00000517654 ATF3P18847 181 aa22.59■■□□□ 1.21
FAM49B-202ENST00000517654 NGDNQ8NEJ9 315 aaKnown RBP22.59■■□□□ 1.21
FAM49B-202ENST00000517654 PIK3C2AO00443 1686 aa22.58■■□□□ 1.21
FAM49B-202ENST00000517654 KIF1AQ12756 1690 aa22.57■■□□□ 1.2
FAM49B-202ENST00000517654 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
FAM49B-202ENST00000517654 CADPS2Q86UW7 1296 aa22.57■■□□□ 1.2
FAM49B-202ENST00000517654 MARF1Q9Y4F3 1742 aaKnown RBP22.57■■□□□ 1.2
FAM49B-202ENST00000517654 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
FAM49B-202ENST00000517654 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
FAM49B-202ENST00000517654 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
FAM49B-202ENST00000517654 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
FAM49B-202ENST00000517654 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
FAM49B-202ENST00000517654 FOXO3O43524 673 aa22.52■■□□□ 1.2
FAM49B-202ENST00000517654 FBLN1P23142 703 aa22.52■■□□□ 1.2
FAM49B-202ENST00000517654 OVOS2A0A0J9YW53 1432 aa22.52■■□□□ 1.2
FAM49B-202ENST00000517654 OVOS2Q6IE36 1432 aa22.52■■□□□ 1.2
FAM49B-202ENST00000517654 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
FAM49B-202ENST00000517654 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
FAM49B-202ENST00000517654 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
FAM49B-202ENST00000517654 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
FAM49B-202ENST00000517654 TTC21AQ8NDW8 1320 aa22.49■■□□□ 1.19
FAM49B-202ENST00000517654 BRINP3Q76B58 766 aa22.48■■□□□ 1.19
FAM49B-202ENST00000517654 SLAIN2Q9P270 581 aa22.47■■□□□ 1.19
FAM49B-202ENST00000517654 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
FAM49B-202ENST00000517654 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
FAM49B-202ENST00000517654 PSME1Q06323 249 aa22.45■■□□□ 1.19
FAM49B-202ENST00000517654 PXDNQ92626 1479 aa22.45■■□□□ 1.18
FAM49B-202ENST00000517654 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
FAM49B-202ENST00000517654 SHPRHQ149N8 1683 aa22.45■■□□□ 1.18
FAM49B-202ENST00000517654 ALS2Q96Q42 1657 aa22.45■■□□□ 1.18
FAM49B-202ENST00000517654 MTHFSP49914 203 aa22.44■■□□□ 1.18
FAM49B-202ENST00000517654 NUTM2GQ5VZR2 741 aa22.44■■□□□ 1.18
FAM49B-202ENST00000517654 COG3Q96JB2 828 aa22.44■■□□□ 1.18
FAM49B-202ENST00000517654 PAK3O75914 559 aaPredicted RBP22.43■■□□□ 1.18
FAM49B-202ENST00000517654 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
FAM49B-202ENST00000517654 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
FAM49B-202ENST00000517654 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
FAM49B-202ENST00000517654 COL3A1P02461 1466 aaPredicted RBP22.42■■□□□ 1.18
FAM49B-202ENST00000517654 NHSL1Q5SYE7 1610 aa22.41■■□□□ 1.18
FAM49B-202ENST00000517654 PEAK1Q9H792 1746 aa22.41■■□□□ 1.18
FAM49B-202ENST00000517654 POLKQ9UBT6 870 aa22.41■■□□□ 1.18
FAM49B-202ENST00000517654 ABTB2Q8N961 1025 aa22.4■■□□□ 1.18
FAM49B-202ENST00000517654 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
FAM49B-202ENST00000517654 AATKQ6ZMQ8 1374 aa22.4■■□□□ 1.18
FAM49B-202ENST00000517654 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.17
FAM49B-202ENST00000517654 NLRP6P59044 892 aa22.38■■□□□ 1.17
FAM49B-202ENST00000517654 ROBO1Q9Y6N7 1651 aa22.38■■□□□ 1.17
FAM49B-202ENST00000517654 RRS1Q15050 365 aaKnown RBP22.38■■□□□ 1.17
FAM49B-202ENST00000517654 NPHP3Q7Z494 1330 aa22.37■■□□□ 1.17
FAM49B-202ENST00000517654 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
FAM49B-202ENST00000517654 PNPLA6Q8IY17 1366 aa22.36■■□□□ 1.17
FAM49B-202ENST00000517654 SOX12O15370 315 aa22.36■■□□□ 1.17
FAM49B-202ENST00000517654 NFAT5O94916 1531 aa22.35■■□□□ 1.17
FAM49B-202ENST00000517654 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
FAM49B-202ENST00000517654 SBNO1A3KN83 1393 aa22.34■■□□□ 1.17
FAM49B-202ENST00000517654 SLIT3O75094 1523 aa22.34■■□□□ 1.17
FAM49B-202ENST00000517654 SOS2Q07890 1332 aaPredicted RBP22.33■■□□□ 1.17
FAM49B-202ENST00000517654 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.16
FAM49B-202ENST00000517654 CERKQ8TCT0 537 aa22.33■■□□□ 1.16
FAM49B-202ENST00000517654 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
FAM49B-202ENST00000517654 CDK12Q9NYV4 1490 aaPredicted RBP22.32■■□□□ 1.16
FAM49B-202ENST00000517654 USP19O94966 1318 aa22.31■■□□□ 1.16
FAM49B-202ENST00000517654 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
FAM49B-202ENST00000517654 INSRP06213 1382 aa22.31■■□□□ 1.16
FAM49B-202ENST00000517654 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
FAM49B-202ENST00000517654 PHRF1Q9P1Y6 1649 aaKnown RBP22.3■■□□□ 1.16
FAM49B-202ENST00000517654 LTN1O94822 1766 aa22.3■■□□□ 1.16
FAM49B-202ENST00000517654 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
FAM49B-202ENST00000517654 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
FAM49B-202ENST00000517654 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
FAM49B-202ENST00000517654 PLEKHG5O94827 1062 aa22.29■■□□□ 1.16
FAM49B-202ENST00000517654 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
FAM49B-202ENST00000517654 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
FAM49B-202ENST00000517654 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
FAM49B-202ENST00000517654 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
FAM49B-202ENST00000517654 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
FAM49B-202ENST00000517654 WDR43Q15061 677 aaKnown RBP eCLIP22.24■■□□□ 1.15
FAM49B-202ENST00000517654 CABLES1Q8TDN4 633 aa22.24■■□□□ 1.15
FAM49B-202ENST00000517654 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
FAM49B-202ENST00000517654 GCP02774 474 aa22.24■■□□□ 1.15
FAM49B-202ENST00000517654 HSP90AB2PQ58FF8 381 aa22.24■■□□□ 1.15
FAM49B-202ENST00000517654 IL13P35225 146 aa22.22■■□□□ 1.15
FAM49B-202ENST00000517654 COL16A1Q07092 1604 aaPredicted RBP22.22■■□□□ 1.15
FAM49B-202ENST00000517654 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
FAM49B-202ENST00000517654 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
FAM49B-202ENST00000517654 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
FAM49B-202ENST00000517654 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
FAM49B-202ENST00000517654 PIP4K2BP78356 416 aa22.2■■□□□ 1.14
FAM49B-202ENST00000517654 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
FAM49B-202ENST00000517654 FLT4P35916 1363 aa22.2■■□□□ 1.14
FAM49B-202ENST00000517654 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
FAM49B-202ENST00000517654 EIF4A2Q14240 407 aaKnown RBP22.2■■□□□ 1.14
FAM49B-202ENST00000517654 TOM1O60784 492 aa22.19■■□□□ 1.14
FAM49B-202ENST00000517654 HOXC9P31274 260 aa22.19■■□□□ 1.14
FAM49B-202ENST00000517654 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
FAM49B-202ENST00000517654 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
FAM49B-202ENST00000517654 U2SURPO15042 1029 aaKnown RBP22.17■■□□□ 1.14
FAM49B-202ENST00000517654 COL18A1P39060 1754 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms