RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 GBP4Q96PP9 640 aa4.25□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CHMP5Q9NZZ3 219 aa4.25□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CACNA1FO60840 1977 aa4.25□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 MYO5BQ9ULV0 1848 aa4.25□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 KIF24Q5T7B8 1368 aa4.25□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CDK12Q9NYV4 1490 aaPredicted RBP4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ADGRF5Q8IZF2 1346 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 SIGLEC1Q9BZZ2 1709 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 GOLGA6L3A6NEY3 463 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 BRPF1P55201 1214 aaPredicted RBP4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CASC1Q6TDU7 716 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CCDC146Q8IYE0 955 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 GCC1Q96CN9 775 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 SMC4Q9NTJ3 1288 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ARHGEF40Q8TER5 1519 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 MON2Q7Z3U7 1717 aa4.24□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 MAP2P11137 1827 aaKnown RBP4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 AKAP12Q02952 1782 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 AGLP35573 1532 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 BCAR3O75815 825 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 U2AF1L5P0DN76 240 aaPredicted RBP4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 U2AF1Q01081 240 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ATF7IPQ6VMQ6 1270 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ARHGAP45Q92619 1136 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CARD14Q9BXL6 1004 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 COG6Q9Y2V7 657 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 IBTKQ9P2D0 1353 aaPredicted RBP4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 PTPRMP28827 1452 aa4.23□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 PTCH1Q13635 1447 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 NCOA3Q9Y6Q9 1424 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 LRRC7Q96NW7 1537 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 FCHSD2O94868 740 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 HSP90AA1P07900 732 aaKnown RBP4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 CHGAP10645 457 aaKnown RBP4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 MTHFSP49914 203 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 MRE11P49959 708 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ITPRIPQ8IWB1 547 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 SMC5Q8IY18 1101 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 SNX21Q969T3 373 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 C22orf23Q9BZE7 217 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 TRAK1Q9UPV9 953 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 A0A1W2PP64 1363 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 PNPLA6Q8IY17 1366 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 NRKQ7Z2Y5 1582 aa4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 N4BP2Q86UW6 1770 aaPredicted RBP4.22□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 FAM135BQ49AJ0 1406 aa4.21□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 EDC4Q6P2E9 1401 aaKnown RBP4.21□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 YTHDC2Q9H6S0 1430 aaKnown RBP4.21□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 ALKQ9UM73 1620 aa4.21□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 SETD1AO15047 1707 aaKnown RBP4.21□□□□□ -1.73
RNU4ATAC3P-201ENST00000516699 DLG5Q8TDM6 1919 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 DIAPH1O60610 1272 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 FRAT2O75474 233 aaPredicted RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 IGHDP01880 384 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TMPOP42166 694 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RBM25P49756 843 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 HDGFP51858 240 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 GNAI1P63096 354 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SRPK2P78362 688 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 KLHL34Q8N239 644 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PANK1Q8TE04 598 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TRIM44Q96DX7 344 aaPredicted RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 API5Q9BZZ5 524 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PDZRN3Q9UPQ7 1066 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 AATKQ6ZMQ8 1374 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 PIK3R4Q99570 1358 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SPATA31D1Q6ZQQ2 1576 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RIMS1Q86UR5 1692 aaKnown RBP4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 FMN2Q9NZ56 1722 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RIMBP3CA6NJZ7 1639 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RIMBP3BA6NNM3 1639 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 RIMBP3Q9UFD9 1639 aa4.21□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SENP3-EIF4A1A0A087X0R7 540 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 HSP90AB1P08238 724 aaKnown RBP4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TRIM27P14373 513 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MCM4P33991 863 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NUCB1Q02818 461 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NEUROD2Q15784 382 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CHMP4AQ9BY43 222 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 TBC1D2Q9BYX2 928 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SLC12A5Q9H2X9 1139 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ANTXR1Q9H6X2 564 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 IFT57Q9NWB7 429 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 POGKQ9P215 609 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 DMRT2Q9Y5R5 561 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 NALCNQ8IZF0 1738 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CPS1P31327 1500 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CPSF1Q10570 1443 aaKnown RBP4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 USP19O94966 1318 aa4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 SOS1Q07889 1333 aaPredicted RBP4.2□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 C3P01024 1663 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ARHGEF10O15013 1369 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 U2SURPO15042 1029 aaKnown RBP4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 ST18O60284 1047 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 CDC45O75419 566 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 REC8O95072 547 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MCM2P49736 904 aa4.19□□□□□ -1.74
RNU4ATAC3P-201ENST00000516699 MFAP1P55081 439 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms