RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 QSER1Q2KHR3 1735 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 KIAA1551Q9HCM1 1747 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 LRRC37A3O60309 1634 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 HFM1A2PYH4 1435 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 TNS3Q68CZ2 1445 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 SPATA31A1Q5TZJ5 1347 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 NPHP3Q7Z494 1330 aa1.91□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 SBF1O95248 1867 aa1.9□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 CCDC88AQ3V6T2 1871 aa1.9□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 AKAP12Q02952 1782 aa1.9□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 TOPAZ1Q8N9V7 1692 aa1.9□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 ADGRB1O14514 1584 aa1.9□□□□□ -2.1
RNU4ATAC11P-201ENST00000515939 SBNO1A3KN83 1393 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 NUP155O75694 1391 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 LRPPRCP42704 1394 aaKnown RBP1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ROCK1Q13464 1354 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ABCC11Q96J66 1382 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 TAF1LQ8IZX4 1826 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 KCNQ2O43526 872 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 CHRNA2Q15822 529 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 FOXD1Q16676 465 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 DNAJC5GQ8N7S2 189 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SYT17Q9BSW7 474 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 BTG4Q9NY30 223 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 STK26Q9P289 416 aa1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 BRCA1P38398 1863 aaKnown RBP1.9□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ADGRB2O60241 1585 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 LY75O60449 1722 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ARHGEF28Q8N1W1 1705 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 TOGARAM1Q9Y4F4 1720 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SENP3-EIF4A1A0A087X0R7 540 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ZBTB7AO95365 584 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 APBA3O96018 575 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 YBX3P16989 372 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 BAG6P46379 1132 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 HDGFP51858 240 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 LARP1Q6PKG0 1096 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PMFBP1Q8TBY8 1022 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 FHDC1Q9C0D6 1143 aaPredicted RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 C14orf93Q9H972 538 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 LRRC4BQ9NT99 713 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PHF8Q9UPP1 1060 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ATF5Q9Y2D1 282 aaPredicted RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PIK3C2GO75747 1445 aa1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 YTHDC2Q9H6S0 1430 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 MAP2P11137 1827 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 MYH14Q7Z406 1995 aaKnown RBP1.89□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ATP7BP35670 1465 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 KIAA0232Q92628 1395 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 NINLQ9Y2I6 1382 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 N4BP2Q86UW6 1770 aaPredicted RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PIK3C2AO00443 1686 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 NHSQ6T4R5 1651 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 FAM50AQ14320 339 aaKnown RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ZNF827Q17R98 1081 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ZNF326Q5BKZ1 582 aaKnown RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 CFAP70Q5T0N1 1121 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 AMIGO3Q86WK7 504 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PPARGC1BQ86YN6 1023 aaKnown RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 MARCH10Q8NA82 808 aaPredicted RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 NLGN2Q8NFZ4 835 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SIRT1Q96EB6 747 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 AXIN2Q9Y2T1 843 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ITGB4P16144 1822 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 CCDC144AA2RUR9 1427 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SSH2Q76I76 1423 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 RRBP1Q9P2E9 1410 aaKnown RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 UBR3Q6ZT12 1888 aa1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ACIN1Q9UKV3 1341 aaKnown RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 COL5A2P05997 1499 aaPredicted RBP1.88□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ADCY9O60503 1353 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 DLC1Q96QB1 1528 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 USP54Q70EL1 1684 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 KIF13BQ9NQT8 1826 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PLSCR1O15162 318 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 KCNQ4P56696 695 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ZC3H6P61129 1189 aaKnown RBP1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 HTRA3P83110 453 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SAFB2Q14151 953 aaKnown RBP eCLIP1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 ITSN1Q15811 1721 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 COL13A1Q5TAT6 717 aaPredicted RBP1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 NUTM2GQ5VZR2 741 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 FAM196AQ6ZSG2 479 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 BARGINQ6ZT62 677 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SMIM5Q71RC9 77 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 WDR90Q96KV7 1748 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PRAM1Q96QH2 718 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 HIRIP3Q9BW71 556 aaPredicted RBP1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SPON1Q9HCB6 807 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 CCDC9Q9Y3X0 531 aaKnown RBP1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 LTN1O94822 1766 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 USP19O94966 1318 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 RPGRIP1LQ68CZ1 1315 aa1.87□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 CEP290O15078 2479 aa1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 SLIT3O75094 1523 aa1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 TULP4Q9NRJ4 1543 aa1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 DHX57Q6P158 1386 aaKnown RBP1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 PARD3Q8TEW0 1356 aa1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 MAP3K5Q99683 1374 aa1.86□□□□□ -2.11
RNU4ATAC11P-201ENST00000515939 BCL9O00512 1426 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms