RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
DDR1-276ENST00000514534 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
DDR1-276ENST00000514534 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
DDR1-276ENST00000514534 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
DDR1-276ENST00000514534 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
DDR1-276ENST00000514534 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
DDR1-276ENST00000514534 CRYBG1Q9Y4K1 1723 aa15.14■□□□□ 0.01
DDR1-276ENST00000514534 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
DDR1-276ENST00000514534 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
DDR1-276ENST00000514534 EZH2Q15910 746 aaKnown RBP15.13■□□□□ 0.01
DDR1-276ENST00000514534 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
DDR1-276ENST00000514534 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
DDR1-276ENST00000514534 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
DDR1-276ENST00000514534 TULP4Q9NRJ4 1543 aa15.12■□□□□ 0.01
DDR1-276ENST00000514534 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
DDR1-276ENST00000514534 NGDNQ8NEJ9 315 aaKnown RBP15.1■□□□□ 0.01
DDR1-276ENST00000514534 CAMKK2Q96RR4 588 aa15.1■□□□□ 0.01
DDR1-276ENST00000514534 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
DDR1-276ENST00000514534 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
DDR1-276ENST00000514534 TRIM37O94972 964 aa15.09■□□□□ 0.01
DDR1-276ENST00000514534 RREB1Q92766 1687 aa15.09■□□□□ 0.01
DDR1-276ENST00000514534 ADGRB1O14514 1584 aa15.08■□□□□ 0
DDR1-276ENST00000514534 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
DDR1-276ENST00000514534 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0
DDR1-276ENST00000514534 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0
DDR1-276ENST00000514534 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
DDR1-276ENST00000514534 APBA3O96018 575 aa15.07■□□□□ 0
DDR1-276ENST00000514534 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
DDR1-276ENST00000514534 NBPF14Q5TI25 921 aa15.07■□□□□ 0
DDR1-276ENST00000514534 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
DDR1-276ENST00000514534 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
DDR1-276ENST00000514534 YY1P25490 414 aa15.06■□□□□ 0
DDR1-276ENST00000514534 KIAA0232Q92628 1395 aa15.06■□□□□ 0
DDR1-276ENST00000514534 ATP7BP35670 1465 aa15.06■□□□□ 0
DDR1-276ENST00000514534 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
DDR1-276ENST00000514534 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
DDR1-276ENST00000514534 PDE3BQ13370 1112 aa15.05■□□□□ -0
DDR1-276ENST00000514534 STRN4Q9NRL3 753 aa15.05■□□□□ -0
DDR1-276ENST00000514534 BARGINQ6ZT62 677 aa15.04■□□□□ -0
DDR1-276ENST00000514534 EVA1CP58658 441 aa15.03■□□□□ -0
DDR1-276ENST00000514534 CHRNA2Q15822 529 aa15.03■□□□□ -0
DDR1-276ENST00000514534 USP35Q9P2H5 1018 aa15.02■□□□□ -0
DDR1-276ENST00000514534 PPP1R1BQ9UD71 204 aaPredicted RBP15.02■□□□□ -0
DDR1-276ENST00000514534 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
DDR1-276ENST00000514534 C11orf95C9JLR9 678 aaPredicted RBP15.01□□□□□ -0.01
DDR1-276ENST00000514534 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
DDR1-276ENST00000514534 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
DDR1-276ENST00000514534 SPON1Q9HCB6 807 aa15.01□□□□□ -0.01
DDR1-276ENST00000514534 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
DDR1-276ENST00000514534 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
DDR1-276ENST00000514534 TCP11L2Q8N4U5 519 aa14.99□□□□□ -0.01
DDR1-276ENST00000514534 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
DDR1-276ENST00000514534 THRAP3Q9Y2W1 955 aaKnown RBP14.99□□□□□ -0.01
DDR1-276ENST00000514534 PARP4Q9UKK3 1724 aaKnown RBP14.98□□□□□ -0.01
DDR1-276ENST00000514534 KCNQ2O43526 872 aa14.98□□□□□ -0.01
DDR1-276ENST00000514534 NRKQ7Z2Y5 1582 aa14.98□□□□□ -0.01
DDR1-276ENST00000514534 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 NUTM2GQ5VZR2 741 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 KDM2AQ9Y2K7 1162 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 RGPD3A6NKT7 1758 aaPredicted RBP14.97□□□□□ -0.01
DDR1-276ENST00000514534 RGPD4Q7Z3J3 1758 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 POLR3AO14802 1390 aaPredicted RBP14.97□□□□□ -0.01
DDR1-276ENST00000514534 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
DDR1-276ENST00000514534 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
DDR1-276ENST00000514534 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
DDR1-276ENST00000514534 CPDO75976 1380 aa14.96□□□□□ -0.02
DDR1-276ENST00000514534 ABTB2Q8N961 1025 aa14.95□□□□□ -0.02
DDR1-276ENST00000514534 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
DDR1-276ENST00000514534 ACEP12821 1306 aa14.94□□□□□ -0.02
DDR1-276ENST00000514534 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
DDR1-276ENST00000514534 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
DDR1-276ENST00000514534 OVOS2A0A0J9YW53 1432 aa14.93□□□□□ -0.02
DDR1-276ENST00000514534 OVOS2Q6IE36 1432 aa14.93□□□□□ -0.02
DDR1-276ENST00000514534 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
DDR1-276ENST00000514534 USP19O94966 1318 aa14.92□□□□□ -0.02
DDR1-276ENST00000514534 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
DDR1-276ENST00000514534 PLSCR1O15162 318 aa14.92□□□□□ -0.02
DDR1-276ENST00000514534 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
DDR1-276ENST00000514534 COL5A2P05997 1499 aaPredicted RBP14.91□□□□□ -0.02
DDR1-276ENST00000514534 PEAK1Q9H792 1746 aa14.91□□□□□ -0.02
DDR1-276ENST00000514534 CRB1P82279 1406 aa14.91□□□□□ -0.02
DDR1-276ENST00000514534 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
DDR1-276ENST00000514534 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
DDR1-276ENST00000514534 GCP02774 474 aa14.89□□□□□ -0.03
DDR1-276ENST00000514534 LRRC37A3O60309 1634 aa14.88□□□□□ -0.03
DDR1-276ENST00000514534 BRD4O60885 1362 aaPredicted RBP14.88□□□□□ -0.03
DDR1-276ENST00000514534 DDB1Q16531 1140 aa14.88□□□□□ -0.03
DDR1-276ENST00000514534 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
DDR1-276ENST00000514534 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
DDR1-276ENST00000514534 WNK3Q9BYP7 1800 aa14.87□□□□□ -0.03
DDR1-276ENST00000514534 PPIP5K1Q6PFW1 1433 aa14.86□□□□□ -0.03
DDR1-276ENST00000514534 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
DDR1-276ENST00000514534 CHD4Q14839 1912 aa14.85□□□□□ -0.03
DDR1-276ENST00000514534 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
DDR1-276ENST00000514534 ZBTB7CA1YPR0 619 aa14.84□□□□□ -0.03
DDR1-276ENST00000514534 SRPK2P78362 688 aaKnown RBP14.84□□□□□ -0.03
DDR1-276ENST00000514534 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
DDR1-276ENST00000514534 CDCA7Q9BWT1 371 aaPredicted RBP14.84□□□□□ -0.03
DDR1-276ENST00000514534 ANO8Q9HCE9 1232 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms