RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
PROM1-213ENST00000512304 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
PROM1-213ENST00000512304 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
PROM1-213ENST00000512304 UTRNP46939 3433 aa13.87□□□□□ -0.19
PROM1-213ENST00000512304 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
PROM1-213ENST00000512304 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
PROM1-213ENST00000512304 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
PROM1-213ENST00000512304 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
PROM1-213ENST00000512304 THSD7AQ9UPZ6 1657 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 KCNQ2O43526 872 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 PTF1AQ7RTS3 328 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
PROM1-213ENST00000512304 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
PROM1-213ENST00000512304 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 FAM196AQ6ZSG2 479 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 SPON1Q9HCB6 807 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
PROM1-213ENST00000512304 PRDM11Q9NQV5 511 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 PPLO60437 1756 aa13.85□□□□□ -0.19
PROM1-213ENST00000512304 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
PROM1-213ENST00000512304 KIF1BO60333 1816 aa13.84□□□□□ -0.19
PROM1-213ENST00000512304 KIAA0232Q92628 1395 aa13.83□□□□□ -0.19
PROM1-213ENST00000512304 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
PROM1-213ENST00000512304 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
PROM1-213ENST00000512304 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
PROM1-213ENST00000512304 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
PROM1-213ENST00000512304 PAK3O75914 559 aaPredicted RBP13.82□□□□□ -0.2
PROM1-213ENST00000512304 ZBTB7AO95365 584 aa13.82□□□□□ -0.2
PROM1-213ENST00000512304 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
PROM1-213ENST00000512304 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
PROM1-213ENST00000512304 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
PROM1-213ENST00000512304 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PROM1-213ENST00000512304 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
PROM1-213ENST00000512304 NBPF14Q5TI25 921 aa13.8□□□□□ -0.2
PROM1-213ENST00000512304 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
PROM1-213ENST00000512304 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
PROM1-213ENST00000512304 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
PROM1-213ENST00000512304 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
PROM1-213ENST00000512304 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
PROM1-213ENST00000512304 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
PROM1-213ENST00000512304 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
PROM1-213ENST00000512304 PARD3Q8TEW0 1356 aa13.79□□□□□ -0.2
PROM1-213ENST00000512304 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
PROM1-213ENST00000512304 PTGER2P43116 358 aa13.78□□□□□ -0.2
PROM1-213ENST00000512304 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
PROM1-213ENST00000512304 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
PROM1-213ENST00000512304 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
PROM1-213ENST00000512304 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PROM1-213ENST00000512304 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
PROM1-213ENST00000512304 POGKQ9P215 609 aa13.77□□□□□ -0.21
PROM1-213ENST00000512304 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
PROM1-213ENST00000512304 RREB1Q92766 1687 aa13.76□□□□□ -0.21
PROM1-213ENST00000512304 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
PROM1-213ENST00000512304 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
PROM1-213ENST00000512304 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
PROM1-213ENST00000512304 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
PROM1-213ENST00000512304 CEP350Q5VT06 3117 aa13.75□□□□□ -0.21
PROM1-213ENST00000512304 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
PROM1-213ENST00000512304 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
PROM1-213ENST00000512304 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
PROM1-213ENST00000512304 CAPN15O75808 1086 aa13.74□□□□□ -0.21
PROM1-213ENST00000512304 EVA1CP58658 441 aa13.74□□□□□ -0.21
PROM1-213ENST00000512304 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
PROM1-213ENST00000512304 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
PROM1-213ENST00000512304 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
PROM1-213ENST00000512304 BARGINQ6ZT62 677 aa13.73□□□□□ -0.21
PROM1-213ENST00000512304 SYT17Q9BSW7 474 aa13.72□□□□□ -0.21
PROM1-213ENST00000512304 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
PROM1-213ENST00000512304 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
PROM1-213ENST00000512304 MYOM1P52179 1685 aa13.7□□□□□ -0.22
PROM1-213ENST00000512304 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
PROM1-213ENST00000512304 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
PROM1-213ENST00000512304 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
PROM1-213ENST00000512304 ZBTB7CA1YPR0 619 aa13.67□□□□□ -0.22
PROM1-213ENST00000512304 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
PROM1-213ENST00000512304 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
PROM1-213ENST00000512304 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
PROM1-213ENST00000512304 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
PROM1-213ENST00000512304 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
PROM1-213ENST00000512304 PLSCR1O15162 318 aa13.65□□□□□ -0.22
PROM1-213ENST00000512304 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
PROM1-213ENST00000512304 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
PROM1-213ENST00000512304 PHRF1Q9P1Y6 1649 aaKnown RBP13.64□□□□□ -0.23
PROM1-213ENST00000512304 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
PROM1-213ENST00000512304 ACEP12821 1306 aa13.64□□□□□ -0.23
PROM1-213ENST00000512304 ATP7BP35670 1465 aa13.63□□□□□ -0.23
PROM1-213ENST00000512304 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
PROM1-213ENST00000512304 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
PROM1-213ENST00000512304 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
PROM1-213ENST00000512304 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
PROM1-213ENST00000512304 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
PROM1-213ENST00000512304 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
PROM1-213ENST00000512304 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
PROM1-213ENST00000512304 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
PROM1-213ENST00000512304 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
PROM1-213ENST00000512304 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms