RNA–Protein interactions for RNA: ENST00000509661.1

RBM48P1-201, Transcript of RNA binding motif protein 48 pseudogene 1, humanhuman

BASIC

Gene RBM48P1, Length 1,102 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48P1-201ENST00000509661 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
RBM48P1-201ENST00000509661 NUTM2FA1L443 756 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 POTEMA6NI47 508 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 PYGBP11216 843 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 AFF2P51816 1311 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 MST1RQ04912 1400 aa13.04□□□□□ -0.32
RBM48P1-201ENST00000509661 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
RBM48P1-201ENST00000509661 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
RBM48P1-201ENST00000509661 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
RBM48P1-201ENST00000509661 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
RBM48P1-201ENST00000509661 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.33
RBM48P1-201ENST00000509661 RAB3GAP2Q9H2M9 1393 aa13.02□□□□□ -0.33
RBM48P1-201ENST00000509661 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
RBM48P1-201ENST00000509661 SEC24BO95487 1268 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 USP21Q9UK80 565 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 CLTCL1P53675 1640 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
RBM48P1-201ENST00000509661 XIRP1Q702N8 1843 aaKnown RBP13□□□□□ -0.33
RBM48P1-201ENST00000509661 MYO5BQ9ULV0 1848 aa13□□□□□ -0.33
RBM48P1-201ENST00000509661 SIPA1L2Q9P2F8 1722 aaPredicted RBP13□□□□□ -0.33
RBM48P1-201ENST00000509661 LMOD2Q6P5Q4 547 aa13□□□□□ -0.33
RBM48P1-201ENST00000509661 PRAM1Q96QH2 718 aa13□□□□□ -0.33
RBM48P1-201ENST00000509661 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
RBM48P1-201ENST00000509661 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
RBM48P1-201ENST00000509661 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
RBM48P1-201ENST00000509661 KIF1BO60333 1816 aa12.99□□□□□ -0.33
RBM48P1-201ENST00000509661 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
RBM48P1-201ENST00000509661 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
RBM48P1-201ENST00000509661 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
RBM48P1-201ENST00000509661 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
RBM48P1-201ENST00000509661 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
RBM48P1-201ENST00000509661 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
RBM48P1-201ENST00000509661 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
RBM48P1-201ENST00000509661 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
RBM48P1-201ENST00000509661 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
RBM48P1-201ENST00000509661 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
RBM48P1-201ENST00000509661 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
RBM48P1-201ENST00000509661 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
RBM48P1-201ENST00000509661 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
RBM48P1-201ENST00000509661 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
RBM48P1-201ENST00000509661 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
RBM48P1-201ENST00000509661 EIF3AQ14152 1382 aaKnown RBP12.93□□□□□ -0.34
RBM48P1-201ENST00000509661 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
RBM48P1-201ENST00000509661 SPATA31A3Q5VYP0 1347 aa12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 COL16A1Q07092 1604 aaPredicted RBP12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 TECPR2O15040 1411 aa12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 XRN1Q8IZH2 1706 aaKnown RBP12.92□□□□□ -0.34
RBM48P1-201ENST00000509661 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
RBM48P1-201ENST00000509661 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
RBM48P1-201ENST00000509661 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
RBM48P1-201ENST00000509661 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
RBM48P1-201ENST00000509661 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 GSE1Q14687 1217 aa12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
RBM48P1-201ENST00000509661 LRP6O75581 1613 aa12.89□□□□□ -0.35
RBM48P1-201ENST00000509661 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
RBM48P1-201ENST00000509661 ARHGEF10O15013 1369 aa12.88□□□□□ -0.35
RBM48P1-201ENST00000509661 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
RBM48P1-201ENST00000509661 PLCG2P16885 1265 aa12.87□□□□□ -0.35
RBM48P1-201ENST00000509661 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
RBM48P1-201ENST00000509661 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
RBM48P1-201ENST00000509661 MYOM2P54296 1465 aa12.86□□□□□ -0.35
RBM48P1-201ENST00000509661 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
RBM48P1-201ENST00000509661 NUDT16Q96DE0 195 aaKnown RBP12.86□□□□□ -0.35
RBM48P1-201ENST00000509661 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
RBM48P1-201ENST00000509661 SBNO1A3KN83 1393 aa12.85□□□□□ -0.35
RBM48P1-201ENST00000509661 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
RBM48P1-201ENST00000509661 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 A0A0G2JS52 829 aa12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 MYT1Q01538 1121 aa12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
RBM48P1-201ENST00000509661 EVA1CP58658 441 aa12.83□□□□□ -0.36
RBM48P1-201ENST00000509661 PPLO60437 1756 aa12.83□□□□□ -0.36
RBM48P1-201ENST00000509661 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
RBM48P1-201ENST00000509661 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
RBM48P1-201ENST00000509661 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
RBM48P1-201ENST00000509661 VPS72Q15906 364 aa12.82□□□□□ -0.36
RBM48P1-201ENST00000509661 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
RBM48P1-201ENST00000509661 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
RBM48P1-201ENST00000509661 NBPF8Q3BBV2 869 aa12.81□□□□□ -0.36
RBM48P1-201ENST00000509661 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
RBM48P1-201ENST00000509661 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
RBM48P1-201ENST00000509661 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
RBM48P1-201ENST00000509661 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
RBM48P1-201ENST00000509661 NALCNQ8IZF0 1738 aa12.79□□□□□ -0.36
RBM48P1-201ENST00000509661 PXDNQ92626 1479 aa12.79□□□□□ -0.36
RBM48P1-201ENST00000509661 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
RBM48P1-201ENST00000509661 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms