RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 KIF2CQ99661 725 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 KDM5DQ9BY66 1539 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 TULP2O00295 520 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 APAF1O14727 1248 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 CD2BP2O95400 341 aaKnown RBP12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 NUCB2P80303 420 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 CYB5RLQ6IPT4 315 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 TSPYL1Q9H0U9 437 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 RLBP1P12271 317 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 CCDC146Q8IYE0 955 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 DIAPH3Q9NSV4 1193 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 ERBINQ96RT1 1412 aa12.3□□□□□ -0.44
PDGFRA-207ENST00000509092 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 BRD2P25440 801 aaKnown RBP12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
PDGFRA-207ENST00000509092 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 CROCC2H7BZ55 1655 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 SYCE3A1L190 88 aa12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 RARSP54136 660 aaKnown RBP12.28□□□□□ -0.44
PDGFRA-207ENST00000509092 CHAF1AQ13111 956 aaPredicted RBP12.27□□□□□ -0.44
PDGFRA-207ENST00000509092 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.44
PDGFRA-207ENST00000509092 TESK2Q96S53 571 aa12.27□□□□□ -0.44
PDGFRA-207ENST00000509092 ADGRL2O95490 1459 aa12.27□□□□□ -0.45
PDGFRA-207ENST00000509092 PLEKHD1A6NEE1 506 aa12.27□□□□□ -0.45
PDGFRA-207ENST00000509092 CAPN2P17655 700 aa12.27□□□□□ -0.45
PDGFRA-207ENST00000509092 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
PDGFRA-207ENST00000509092 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 SYCP1Q15431 976 aa12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 MVPQ14764 893 aaKnown RBP12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 TERF2Q15554 542 aa12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 CTNNA3Q9UI47 895 aa12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
PDGFRA-207ENST00000509092 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 TSPY26PQ9H489 355 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 DDX41Q9UJV9 622 aaKnown RBP12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 TMF1P82094 1093 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 MORC2Q9Y6X9 1032 aaPredicted RBP12.25□□□□□ -0.45
PDGFRA-207ENST00000509092 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 FAM193AP78312 1265 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
PDGFRA-207ENST00000509092 MBD3O95983 291 aa12.23□□□□□ -0.45
PDGFRA-207ENST00000509092 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
PDGFRA-207ENST00000509092 SYNMO15061 1565 aa12.23□□□□□ -0.45
PDGFRA-207ENST00000509092 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 C17orf53Q8N3J3 647 aaPredicted RBP12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 MMP14P50281 582 aa12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 NCBP1Q09161 790 aaKnown RBP12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
PDGFRA-207ENST00000509092 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
PDGFRA-207ENST00000509092 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
PDGFRA-207ENST00000509092 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.45
PDGFRA-207ENST00000509092 EFCC1Q9HA90 598 aa12.21□□□□□ -0.46
PDGFRA-207ENST00000509092 BMP2KLQ5H9B9 411 aa12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 FAM184AQ8NB25 1140 aa12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 YEATS2Q9ULM3 1422 aa12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 GEMIN8Q9NWZ8 242 aaKnown RBP12.2□□□□□ -0.46
PDGFRA-207ENST00000509092 ASXL2Q76L83 1435 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 MYO5CQ9NQX4 1742 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 PKP1Q13835 747 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 RABEP1Q15276 862 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 KIAA1524Q8TCG1 905 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 SYAP1Q96A49 352 aaPredicted RBP12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
PDGFRA-207ENST00000509092 NUCB1Q02818 461 aa12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 KIF18AQ8NI77 898 aa12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 FEZ2Q9UHY8 353 aaPredicted RBP12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
PDGFRA-207ENST00000509092 PHF14O94880 888 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms