RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CASC1Q6TDU7 716 aa9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 TTC36A6NLP5 189 aa9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 POLD1P28340 1107 aa9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 GET4Q7L5D6 327 aaPredicted RBP9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 DDX56Q9NY93 547 aaKnown RBP9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 MAP3K20Q9NYL2 800 aaKnown RBP9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
PDGFRA-206ENST00000508170 PRC1O43663 620 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 COPB2P35606 906 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 MYSM1Q5VVJ2 828 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 BIN2Q9UBW5 565 aaPredicted RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 ZKSCAN2Q63HK3 967 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 TPX2Q9ULW0 747 aaKnown RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
PDGFRA-206ENST00000508170 ABCC9O60706 1549 aa9.65□□□□□ -0.86
PDGFRA-206ENST00000508170 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
PDGFRA-206ENST00000508170 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
PDGFRA-206ENST00000508170 ERBB3P21860 1342 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 HSD3B2P26439 372 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 ARMCX6Q7L4S7 300 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 POTEDQ86YR6 584 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 JDP2Q8WYK2 163 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 ZRANB2O95218 330 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 HIC1Q14526 733 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 IL17RAQ96F46 866 aa9.64□□□□□ -0.87
PDGFRA-206ENST00000508170 DPYSL4O14531 572 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 CREBRFQ8IUR6 639 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 TSPAN18Q96SJ8 248 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 FRMD4BQ9Y2L6 1034 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 DHX16O60231 1041 aaKnown RBP9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 PDIA6Q15084 440 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 NT5DC4Q86YG4 428 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
PDGFRA-206ENST00000508170 NBPF1Q3BBV0 1214 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 ZNF512BQ96KM6 892 aaPredicted RBP9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 INO80BQ9C086 356 aaPredicted RBP9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 PRM3Q9NNZ6 103 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 NUB1Q9Y5A7 615 aa9.62□□□□□ -0.87
PDGFRA-206ENST00000508170 CSPP1Q1MSJ5 1256 aa9.61□□□□□ -0.87
PDGFRA-206ENST00000508170 LDLRAD1Q5T700 205 aa9.61□□□□□ -0.87
PDGFRA-206ENST00000508170 SFMBT1Q9UHJ3 866 aa9.61□□□□□ -0.87
PDGFRA-206ENST00000508170 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
PDGFRA-206ENST00000508170 DCAF8L1A6NGE4 600 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 SSTR3P32745 418 aaPredicted RBP9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 SLC43A3Q8NBI5 491 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 UBE4AQ14139 1066 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 ICE2Q659A1 982 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 CAPN10Q9HC96 672 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 SH3BP1Q9Y3L3 701 aa9.6□□□□□ -0.87
PDGFRA-206ENST00000508170 POU5F1Q01860 360 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 MRPL58Q14197 206 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 PAGR1Q9BTK6 254 aa9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 NLRP2Q9NX02 1062 aa9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 NRDCO43847 1150 aa9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 ENOX2Q16206 610 aaKnown RBP9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 OSBPL2Q9H1P3 480 aa9.59□□□□□ -0.87
PDGFRA-206ENST00000508170 GOLGA6CA6NDK9 693 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 GOLGA6BA6NDN3 693 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 GOLGA6DP0CG33 693 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 CLCN1P35523 988 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 RBL2Q08999 1139 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 GOLGA6AQ9NYA3 693 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 SCINQ9Y6U3 715 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 CD53P19397 219 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 DNAJA1P31689 397 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 PDE6BP35913 854 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 RASEFQ8IZ41 740 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 TTF2Q9UNY4 1162 aaKnown RBP9.58□□□□□ -0.88
PDGFRA-206ENST00000508170 SOCS7O14512 581 aa9.57□□□□□ -0.88
PDGFRA-206ENST00000508170 PPP2R2DQ66LE6 453 aa9.57□□□□□ -0.88
PDGFRA-206ENST00000508170 TSC1Q92574 1164 aa9.57□□□□□ -0.88
PDGFRA-206ENST00000508170 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
PDGFRA-206ENST00000508170 EPAS1Q99814 870 aa9.57□□□□□ -0.88
PDGFRA-206ENST00000508170 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms