RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KMT5BQ4FZB7 885 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 PKDCCQ504Y2 493 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 LIAT1Q6ZQX7 453 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 RETREG2Q8NC44 543 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 LRRN4Q8WUT4 740 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 TRIM34Q9BYJ4 488 aa5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 HMX1Q9NP08 348 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 CCDC9Q9Y3X0 531 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-205ENST00000506426 GGCXP38435 758 aa5.69□□□□□ -1.5
TRAPPC11-205ENST00000506426 SPRYD7Q5W111 196 aa5.69□□□□□ -1.5
TRAPPC11-205ENST00000506426 FAM187AA6NFU0 413 aa5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 RANGAP1P46060 587 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 VAC14Q08AM6 782 aa5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 AEBP1Q8IUX7 1158 aa5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 PRR7Q8TB68 274 aa5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 SYMPKQ92797 1274 aaKnown RBP5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 DACH1Q9UI36 760 aa5.68□□□□□ -1.5
TRAPPC11-205ENST00000506426 S1PR4O95977 384 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 SOX11P35716 441 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 Q3C1V9 767 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 PLA2G2CQ5R387 149 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 RETREG3Q86VR2 466 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 PNMA1Q8ND90 353 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 ADAMTS19Q8TE59 1207 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 PBXIP1Q96AQ6 731 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 PCDHB3Q9Y5E6 796 aa5.67□□□□□ -1.5
TRAPPC11-205ENST00000506426 ACTN4O43707 911 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 DGAT1O75907 488 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 RFX1P22670 979 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 ZNF697Q5TEC3 545 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 DESI1Q6ICB0 168 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 ZNF598Q86UK7 904 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 EPS8L1Q8TE68 723 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 ALG2Q9H553 416 aa5.66□□□□□ -1.5
TRAPPC11-205ENST00000506426 GDF9O60383 454 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 GPR37L1O60883 481 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 SEMA3FQ13275 785 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 NR6A1Q15406 480 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 MORN1Q5T089 497 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 TREML4Q6UXN2 200 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 PRR14Q9BWN1 585 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 PPP1R12CQ9BZL4 782 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 AAASQ9NRG9 546 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 SLC27A5Q9Y2P5 690 aa5.65□□□□□ -1.5
TRAPPC11-205ENST00000506426 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
TRAPPC11-205ENST00000506426 PUS10Q3MIT2 529 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-205ENST00000506426 CFAP70Q5T0N1 1121 aa5.64□□□□□ -1.51
TRAPPC11-205ENST00000506426 NPM2Q86SE8 214 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-205ENST00000506426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PALM3A6NDB9 673 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PER1O15534 1290 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 LMOD1P29536 600 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 EIF4G2P78344 907 aaKnown RBP eCLIP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PRR20EP86478 221 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PRR20CP86479 221 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PRR20DP86480 221 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PRR20BP86481 221 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PRR20AP86496 221 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 LYPD8Q6UX82 237 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 TFIP11Q9UBB9 837 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 USTQ9Y2C2 406 aa5.63□□□□□ -1.51
TRAPPC11-205ENST00000506426 PATL2C9JE40 543 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-205ENST00000506426 SRPK2P78362 688 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-205ENST00000506426 FOXC1Q12948 553 aa5.62□□□□□ -1.51
TRAPPC11-205ENST00000506426 ANKLE1Q8NAG6 615 aa5.62□□□□□ -1.51
TRAPPC11-205ENST00000506426 USB1Q9BQ65 265 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-205ENST00000506426 PKD2L1Q9P0L9 805 aa5.61□□□□□ -1.51
TRAPPC11-205ENST00000506426 SALL2Q9Y467 1007 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC11-205ENST00000506426 NR1H3Q13133 447 aa5.6□□□□□ -1.51
TRAPPC11-205ENST00000506426 BRICD5Q6PL45 260 aa5.6□□□□□ -1.51
TRAPPC11-205ENST00000506426 GZF1Q9H116 711 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-205ENST00000506426 ZBBXA8MT70 800 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 NR1I2O75469 434 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 FMNL1O95466 1100 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 BRD1O95696 1058 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 LCE2CQ5TA81 110 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 TMCO4Q5TGY1 634 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 RNF19BQ6ZMZ0 732 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 UCN2Q96RP3 112 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 GMPR2Q9P2T1 348 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 FKBPLQ9UIM3 349 aa5.59□□□□□ -1.51
TRAPPC11-205ENST00000506426 ZC3H4Q9UPT8 1303 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 ATP9BO43861 1147 aa5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 ATG7O95352 703 aa5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 KCNA1Q09470 495 aa5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 SCUBE3Q8IX30 993 aa5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 MAFBQ9Y5Q3 323 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-205ENST00000506426 FBXO45P0C2W1 286 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 JUNDP17535 347 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 PTPRNQ16849 979 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 CDCA8Q53HL2 280 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 TBC1D9Q6ZT07 1266 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 VRTNQ9H8Y1 702 aa5.57□□□□□ -1.52
TRAPPC11-205ENST00000506426 WFS1O76024 890 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 ADH1BP00325 375 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 F12P00748 615 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 CTHP32929 405 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 ARMC2Q8NEN0 867 aa5.56□□□□□ -1.52
TRAPPC11-205ENST00000506426 ZNF592Q92610 1267 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms