RNA–Protein interactions for RNA: ENST00000506270.1

SSX8-201, Transcript of Protein SSX8, humanhuman

BASIC

Gene SSX8, Length 579 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8-201ENST00000506270 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
SSX8-201ENST00000506270 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
SSX8-201ENST00000506270 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
SSX8-201ENST00000506270 ABCC3O15438 1527 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 MED14O60244 1454 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 MLH3Q9UHC1 1453 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 IL16Q14005 1332 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 ANTXR1Q9H6X2 564 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
SSX8-201ENST00000506270 NPATQ14207 1427 aa9.4□□□□□ -0.9
SSX8-201ENST00000506270 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
SSX8-201ENST00000506270 FTSJ3Q8IY81 847 aaKnown RBP9.4□□□□□ -0.9
SSX8-201ENST00000506270 DZIP1LQ8IYY4 767 aaKnown RBP9.4□□□□□ -0.9
SSX8-201ENST00000506270 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
SSX8-201ENST00000506270 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.9
SSX8-201ENST00000506270 NEXMIFQ5QGS0 1516 aa9.4□□□□□ -0.91
SSX8-201ENST00000506270 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
SSX8-201ENST00000506270 CDC42BPGQ6DT37 1551 aa9.39□□□□□ -0.91
SSX8-201ENST00000506270 SEC24BO95487 1268 aa9.39□□□□□ -0.91
SSX8-201ENST00000506270 MTHFSP49914 203 aa9.39□□□□□ -0.91
SSX8-201ENST00000506270 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
SSX8-201ENST00000506270 COL3A1P02461 1466 aaPredicted RBP9.39□□□□□ -0.91
SSX8-201ENST00000506270 GABBR2O75899 941 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 RLBP1P12271 317 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 TBC1D2Q9BYX2 928 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
SSX8-201ENST00000506270 CHMP5Q9NZZ3 219 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
SSX8-201ENST00000506270 ZFYVE9O95405 1425 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 ASXL2Q76L83 1435 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
SSX8-201ENST00000506270 KIF16BQ96L93 1317 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 PTMSP20962 102 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
SSX8-201ENST00000506270 SLC12A5Q9H2X9 1139 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 CHMP4BQ9H444 224 aaKnown RBP9.37□□□□□ -0.91
SSX8-201ENST00000506270 POGKQ9P215 609 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 ISY1Q9ULR0 285 aaKnown RBP9.37□□□□□ -0.91
SSX8-201ENST00000506270 TRAK1Q9UPV9 953 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
SSX8-201ENST00000506270 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 EIF5BO60841 1220 aaKnown RBP9.36□□□□□ -0.91
SSX8-201ENST00000506270 U2AF1L5P0DN76 240 aaPredicted RBP9.36□□□□□ -0.91
SSX8-201ENST00000506270 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
SSX8-201ENST00000506270 U2AF1Q01081 240 aaKnown RBP eCLIP9.36□□□□□ -0.91
SSX8-201ENST00000506270 HSCBQ8IWL3 235 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 C22orf23Q9BZE7 217 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 SMC4Q9NTJ3 1288 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 NCOA3Q9Y6Q9 1424 aa9.36□□□□□ -0.91
SSX8-201ENST00000506270 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
SSX8-201ENST00000506270 VGFO15240 615 aaPredicted RBP9.35□□□□□ -0.91
SSX8-201ENST00000506270 IPO8O15397 1037 aaKnown RBP9.35□□□□□ -0.91
SSX8-201ENST00000506270 MCM4P33991 863 aa9.35□□□□□ -0.91
SSX8-201ENST00000506270 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
SSX8-201ENST00000506270 SIGLEC1Q9BZZ2 1709 aa9.35□□□□□ -0.91
SSX8-201ENST00000506270 FSD2A1L4K1 749 aa9.34□□□□□ -0.91
SSX8-201ENST00000506270 TNNT2P45379 298 aaPredicted RBP9.34□□□□□ -0.91
SSX8-201ENST00000506270 ALDH1L2Q3SY69 923 aa9.34□□□□□ -0.91
SSX8-201ENST00000506270 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
SSX8-201ENST00000506270 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
SSX8-201ENST00000506270 BCL2L13Q9BXK5 485 aa9.34□□□□□ -0.91
SSX8-201ENST00000506270 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
SSX8-201ENST00000506270 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 CD109Q6YHK3 1445 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
SSX8-201ENST00000506270 SNX21Q969T3 373 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 TNNQ9UQP3 1299 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 A0A1W2PP64 1363 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 NEO1Q92859 1461 aa9.33□□□□□ -0.92
SSX8-201ENST00000506270 TRIM27P14373 513 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 MFAP1P55081 439 aaKnown RBP9.32□□□□□ -0.92
SSX8-201ENST00000506270 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
SSX8-201ENST00000506270 ITPRIPQ8IWB1 547 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 TERF2IPQ9NYB0 399 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
SSX8-201ENST00000506270 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
SSX8-201ENST00000506270 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
SSX8-201ENST00000506270 MRE11P49959 708 aa9.31□□□□□ -0.92
SSX8-201ENST00000506270 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
SSX8-201ENST00000506270 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
SSX8-201ENST00000506270 PTPRMP28827 1452 aa9.31□□□□□ -0.92
SSX8-201ENST00000506270 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
SSX8-201ENST00000506270 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
SSX8-201ENST00000506270 PREX1Q8TCU6 1659 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 PIK3R4Q99570 1358 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 TRAK2O60296 914 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 NUCB1Q02818 461 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 GBP4Q96PP9 640 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 TMEM131LA2VDJ0 1609 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 FAM135BQ49AJ0 1406 aa9.3□□□□□ -0.92
SSX8-201ENST00000506270 ATP7BP35670 1465 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms