RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 TOM1O60784 492 aa7.53□□□□□ -1.2
CPNE4-205ENST00000505881 HDGFP51858 240 aaKnown RBP7.53□□□□□ -1.2
CPNE4-205ENST00000505881 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
CPNE4-205ENST00000505881 BEGAINQ9BUH8 593 aa7.53□□□□□ -1.2
CPNE4-205ENST00000505881 ZFYVE16Q7Z3T8 1539 aa7.52□□□□□ -1.2
CPNE4-205ENST00000505881 DENND4BO75064 1496 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-205ENST00000505881 SLF2Q8IX21 1173 aa7.52□□□□□ -1.21
CPNE4-205ENST00000505881 C3P01024 1663 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 GOLGA8CPA6NN73 597 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 SLC10A3P09131 477 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 SLC4A3P48751 1232 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 POTEAQ6S8J7 498 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 RDH13Q8NBN7 331 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 LRCH3Q96II8 777 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 CAMSAP1Q5T5Y3 1602 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 SRCAPQ6ZRS2 3230 aa7.51□□□□□ -1.21
CPNE4-205ENST00000505881 ABCA8O94911 1581 aa7.5□□□□□ -1.21
CPNE4-205ENST00000505881 RNF40O75150 1001 aa7.5□□□□□ -1.21
CPNE4-205ENST00000505881 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-205ENST00000505881 EFCAB5A4FU69 1503 aa7.5□□□□□ -1.21
CPNE4-205ENST00000505881 UGGT2Q9NYU1 1516 aa7.5□□□□□ -1.21
CPNE4-205ENST00000505881 SUPT6HQ7KZ85 1726 aaKnown RBP7.49□□□□□ -1.21
CPNE4-205ENST00000505881 CARMIL1Q5VZK9 1371 aa7.49□□□□□ -1.21
CPNE4-205ENST00000505881 RSPH4AQ5TD94 716 aa7.49□□□□□ -1.21
CPNE4-205ENST00000505881 WNT2BQ93097 391 aa7.49□□□□□ -1.21
CPNE4-205ENST00000505881 SOWAHBA6NEL2 793 aa7.48□□□□□ -1.21
CPNE4-205ENST00000505881 BCAMP50895 628 aa7.48□□□□□ -1.21
CPNE4-205ENST00000505881 FHOD3Q2V2M9 1422 aa7.48□□□□□ -1.21
CPNE4-205ENST00000505881 ZMYM4Q5VZL5 1548 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 CFHP08603 1231 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 GCGRP47871 477 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 NECTIN2Q92692 538 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 HECW1Q76N89 1606 aa7.47□□□□□ -1.21
CPNE4-205ENST00000505881 KIF27Q86VH2 1401 aa7.46□□□□□ -1.21
CPNE4-205ENST00000505881 TBC1D2Q9BYX2 928 aa7.46□□□□□ -1.22
CPNE4-205ENST00000505881 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
CPNE4-205ENST00000505881 GOPCQ9HD26 462 aa7.46□□□□□ -1.22
CPNE4-205ENST00000505881 PLSCR2Q9NRY7 297 aa7.46□□□□□ -1.22
CPNE4-205ENST00000505881 ATP10BO94823 1461 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 DIXDC1Q155Q3 683 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 NUTM1Q86Y26 1132 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 SPIRE2Q8WWL2 714 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 ALKQ9UM73 1620 aa7.45□□□□□ -1.22
CPNE4-205ENST00000505881 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
CPNE4-205ENST00000505881 ATP10AO60312 1499 aa7.44□□□□□ -1.22
CPNE4-205ENST00000505881 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
CPNE4-205ENST00000505881 KDM4AO75164 1064 aa7.44□□□□□ -1.22
CPNE4-205ENST00000505881 THSD4Q6ZMP0 1018 aa7.44□□□□□ -1.22
CPNE4-205ENST00000505881 KCTD12Q96CX2 325 aaKnown RBP7.44□□□□□ -1.22
CPNE4-205ENST00000505881 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
CPNE4-205ENST00000505881 CFAP74Q9C0B2 1584 aa7.43□□□□□ -1.22
CPNE4-205ENST00000505881 USP46P62068 366 aa7.43□□□□□ -1.22
CPNE4-205ENST00000505881 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
CPNE4-205ENST00000505881 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
CPNE4-205ENST00000505881 C9orf84Q5VXU9 1444 aa7.43□□□□□ -1.22
CPNE4-205ENST00000505881 HOXA2O43364 376 aa7.42□□□□□ -1.22
CPNE4-205ENST00000505881 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
CPNE4-205ENST00000505881 PPP4CP60510 307 aa7.42□□□□□ -1.22
CPNE4-205ENST00000505881 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
CPNE4-205ENST00000505881 MYT1LQ9UL68 1186 aa7.42□□□□□ -1.22
CPNE4-205ENST00000505881 MOXD2PA6NHM9 499 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 ACTN4O43707 911 aaKnown RBP7.41□□□□□ -1.22
CPNE4-205ENST00000505881 FUT2Q10981 343 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 PCMTD1Q96MG8 357 aaPredicted RBP7.41□□□□□ -1.22
CPNE4-205ENST00000505881 PRR14Q9BWN1 585 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
CPNE4-205ENST00000505881 POLR3EQ9NVU0 708 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 WBP1LQ9NX94 342 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 PTPRKQ15262 1439 aa7.41□□□□□ -1.22
CPNE4-205ENST00000505881 APLP1P51693 650 aa7.4□□□□□ -1.22
CPNE4-205ENST00000505881 RSBN1LQ6PCB5 846 aaPredicted RBP7.4□□□□□ -1.22
CPNE4-205ENST00000505881 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
CPNE4-205ENST00000505881 CPS1P31327 1500 aa7.4□□□□□ -1.22
CPNE4-205ENST00000505881 CTTNBP2Q8WZ74 1663 aa7.39□□□□□ -1.23
CPNE4-205ENST00000505881 SPTLC1O15269 473 aa7.39□□□□□ -1.23
CPNE4-205ENST00000505881 NDUFV2P19404 249 aa7.39□□□□□ -1.23
CPNE4-205ENST00000505881 RIC3Q7Z5B4 369 aa7.39□□□□□ -1.23
CPNE4-205ENST00000505881 GOLGA3Q08378 1498 aa7.38□□□□□ -1.23
CPNE4-205ENST00000505881 GJA5P36382 358 aa7.38□□□□□ -1.23
CPNE4-205ENST00000505881 TUSC1Q2TAM9 212 aa7.38□□□□□ -1.23
CPNE4-205ENST00000505881 SPNS2Q8IVW8 549 aa7.38□□□□□ -1.23
CPNE4-205ENST00000505881 PROCA1Q8NCQ7 364 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-205ENST00000505881 HLA-CQ95604 372 aa7.38□□□□□ -1.23
CPNE4-205ENST00000505881 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPNE4-205ENST00000505881 TCOF1Q13428 1488 aaKnown RBP7.37□□□□□ -1.23
CPNE4-205ENST00000505881 SHANK2Q9UPX8 1470 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 SCAPERQ9BY12 1400 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 FDX1P10109 184 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 ATP6V1AP38606 617 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 NYAP1Q6ZVC0 841 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 TRIM52Q96A61 297 aa7.37□□□□□ -1.23
CPNE4-205ENST00000505881 PLA2R1Q13018 1463 aa7.36□□□□□ -1.23
CPNE4-205ENST00000505881 RAPGEF2Q9Y4G8 1499 aa7.36□□□□□ -1.23
CPNE4-205ENST00000505881 ZNF142P52746 1687 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-205ENST00000505881 PTPN5P54829 565 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms