RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 TULP4Q9NRJ4 1543 aa14.04□□□□□ -0.16
PDE4D-212ENST00000505453 ATMINO43313 823 aaPredicted RBP14.04□□□□□ -0.16
PDE4D-212ENST00000505453 SRPK2P78362 688 aaKnown RBP14.04□□□□□ -0.16
PDE4D-212ENST00000505453 MED14O60244 1454 aa14.04□□□□□ -0.16
PDE4D-212ENST00000505453 LHX8Q68G74 356 aa14.03□□□□□ -0.16
PDE4D-212ENST00000505453 FAM9BQ8IZU0 186 aa14.03□□□□□ -0.16
PDE4D-212ENST00000505453 ARHGEF28Q8N1W1 1705 aaKnown RBP14.03□□□□□ -0.16
PDE4D-212ENST00000505453 QRICH2Q9H0J4 1663 aa14.02□□□□□ -0.16
PDE4D-212ENST00000505453 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.16
PDE4D-212ENST00000505453 TECPR2O15040 1411 aa14.01□□□□□ -0.17
PDE4D-212ENST00000505453 PTPRUQ92729 1446 aa14.01□□□□□ -0.17
PDE4D-212ENST00000505453 CEP170BQ9Y4F5 1589 aaPredicted RBP14.01□□□□□ -0.17
PDE4D-212ENST00000505453 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
PDE4D-212ENST00000505453 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
PDE4D-212ENST00000505453 TIE1P35590 1138 aa14□□□□□ -0.17
PDE4D-212ENST00000505453 AMOTL2Q9Y2J4 779 aa14□□□□□ -0.17
PDE4D-212ENST00000505453 FAM135BQ49AJ0 1406 aa14□□□□□ -0.17
PDE4D-212ENST00000505453 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
PDE4D-212ENST00000505453 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
PDE4D-212ENST00000505453 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
PDE4D-212ENST00000505453 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
PDE4D-212ENST00000505453 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
PDE4D-212ENST00000505453 WASLO00401 505 aaPredicted RBP13.98□□□□□ -0.17
PDE4D-212ENST00000505453 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
PDE4D-212ENST00000505453 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
PDE4D-212ENST00000505453 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
PDE4D-212ENST00000505453 TRPC6Q9Y210 931 aa13.98□□□□□ -0.17
PDE4D-212ENST00000505453 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
PDE4D-212ENST00000505453 MYOM1P52179 1685 aa13.98□□□□□ -0.17
PDE4D-212ENST00000505453 PPP2R1AP30153 589 aa13.97□□□□□ -0.17
PDE4D-212ENST00000505453 CABP1Q9NZU7 370 aa13.97□□□□□ -0.17
PDE4D-212ENST00000505453 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.17
PDE4D-212ENST00000505453 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.17
PDE4D-212ENST00000505453 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.18
PDE4D-212ENST00000505453 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.18
PDE4D-212ENST00000505453 SLC39A7Q92504 469 aa13.96□□□□□ -0.18
PDE4D-212ENST00000505453 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
PDE4D-212ENST00000505453 CPS1P31327 1500 aa13.94□□□□□ -0.18
PDE4D-212ENST00000505453 TERF2IPQ9NYB0 399 aa13.94□□□□□ -0.18
PDE4D-212ENST00000505453 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
PDE4D-212ENST00000505453 C7P10643 843 aa13.93□□□□□ -0.18
PDE4D-212ENST00000505453 NUDT16Q96DE0 195 aaKnown RBP13.93□□□□□ -0.18
PDE4D-212ENST00000505453 KCNA6P17658 529 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 METRNQ9UJH8 293 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 PCDHB8Q9UN66 801 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 A0A1W2PP64 1363 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
PDE4D-212ENST00000505453 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
PDE4D-212ENST00000505453 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
PDE4D-212ENST00000505453 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
PDE4D-212ENST00000505453 DIP2AQ14689 1571 aa13.91□□□□□ -0.18
PDE4D-212ENST00000505453 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
PDE4D-212ENST00000505453 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
PDE4D-212ENST00000505453 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-212ENST00000505453 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
PDE4D-212ENST00000505453 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-212ENST00000505453 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
PDE4D-212ENST00000505453 ECM2O94769 699 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-212ENST00000505453 ZNF467Q7Z7K2 595 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-212ENST00000505453 FYB1O15117 783 aa13.88□□□□□ -0.19
PDE4D-212ENST00000505453 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
PDE4D-212ENST00000505453 PPIP5K1Q6PFW1 1433 aa13.87□□□□□ -0.19
PDE4D-212ENST00000505453 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
PDE4D-212ENST00000505453 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
PDE4D-212ENST00000505453 RNF25Q96BH1 459 aaPredicted RBP13.87□□□□□ -0.19
PDE4D-212ENST00000505453 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
PDE4D-212ENST00000505453 NSD2O96028 1365 aa13.86□□□□□ -0.19
PDE4D-212ENST00000505453 GTF3C3Q9Y5Q9 886 aa13.85□□□□□ -0.19
PDE4D-212ENST00000505453 CPSF1Q10570 1443 aaKnown RBP13.85□□□□□ -0.19
PDE4D-212ENST00000505453 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.85□□□□□ -0.19
PDE4D-212ENST00000505453 ATP7BP35670 1465 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 PLEKHG3A1L390 1219 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 HSPA2P54652 639 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 12.3
PDE4D-212ENST00000505453 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
PDE4D-212ENST00000505453 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.19
PDE4D-212ENST00000505453 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
PDE4D-212ENST00000505453 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
PDE4D-212ENST00000505453 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
PDE4D-212ENST00000505453 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
PDE4D-212ENST00000505453 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
PDE4D-212ENST00000505453 MTHFSP49914 203 aa13.81□□□□□ -0.2
PDE4D-212ENST00000505453 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDE4D-212ENST00000505453 ACEP12821 1306 aa13.81□□□□□ -0.2
PDE4D-212ENST00000505453 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
PDE4D-212ENST00000505453 INSRP06213 1382 aa13.81□□□□□ -0.2
PDE4D-212ENST00000505453 NME9Q86XW9 330 aa13.8□□□□□ -0.2
PDE4D-212ENST00000505453 EDC4Q6P2E9 1401 aaKnown RBP13.79□□□□□ -0.2
PDE4D-212ENST00000505453 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
PDE4D-212ENST00000505453 RGL2O15211 777 aa13.79□□□□□ -0.2
PDE4D-212ENST00000505453 IER5LQ5T953 404 aa13.79□□□□□ -0.2
PDE4D-212ENST00000505453 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
PDE4D-212ENST00000505453 CDC42BPGQ6DT37 1551 aa13.78□□□□□ -0.2
PDE4D-212ENST00000505453 TTC21BQ7Z4L5 1316 aa13.78□□□□□ -0.2
PDE4D-212ENST00000505453 SEC24BO95487 1268 aa13.77□□□□□ -0.21
PDE4D-212ENST00000505453 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-212ENST00000505453 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms