RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-219ENST00000505392 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
CCHCR1-219ENST00000505392 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
CCHCR1-219ENST00000505392 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.35
CCHCR1-219ENST00000505392 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
CCHCR1-219ENST00000505392 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
CCHCR1-219ENST00000505392 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
CCHCR1-219ENST00000505392 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
CCHCR1-219ENST00000505392 NBPF8Q3BBV2 869 aa17.2■□□□□ 0.34
CCHCR1-219ENST00000505392 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
CCHCR1-219ENST00000505392 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-219ENST00000505392 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
CCHCR1-219ENST00000505392 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
CCHCR1-219ENST00000505392 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
CCHCR1-219ENST00000505392 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
CCHCR1-219ENST00000505392 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
CCHCR1-219ENST00000505392 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
CCHCR1-219ENST00000505392 EVA1CP58658 441 aa17.18■□□□□ 0.34
CCHCR1-219ENST00000505392 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-219ENST00000505392 WASLO00401 505 aaPredicted RBP17.17■□□□□ 0.34
CCHCR1-219ENST00000505392 ZC3H6P61129 1189 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-219ENST00000505392 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
CCHCR1-219ENST00000505392 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
CCHCR1-219ENST00000505392 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
CCHCR1-219ENST00000505392 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
CCHCR1-219ENST00000505392 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
CCHCR1-219ENST00000505392 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
CCHCR1-219ENST00000505392 BARGINQ6ZT62 677 aa17.14■□□□□ 0.33
CCHCR1-219ENST00000505392 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
CCHCR1-219ENST00000505392 KCNQ2O43526 872 aa17.13■□□□□ 0.33
CCHCR1-219ENST00000505392 EIF3AQ14152 1382 aaKnown RBP17.13■□□□□ 0.33
CCHCR1-219ENST00000505392 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-219ENST00000505392 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
CCHCR1-219ENST00000505392 TNS1Q9HBL0 1735 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-219ENST00000505392 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
CCHCR1-219ENST00000505392 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
CCHCR1-219ENST00000505392 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-219ENST00000505392 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
CCHCR1-219ENST00000505392 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-219ENST00000505392 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
CCHCR1-219ENST00000505392 TULP4Q9NRJ4 1543 aa17.07■□□□□ 0.32
CCHCR1-219ENST00000505392 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
CCHCR1-219ENST00000505392 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
CCHCR1-219ENST00000505392 THRAP3Q9Y2W1 955 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-219ENST00000505392 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
CCHCR1-219ENST00000505392 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
CCHCR1-219ENST00000505392 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
CCHCR1-219ENST00000505392 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
CCHCR1-219ENST00000505392 ACEP12821 1306 aa17.03■□□□□ 0.32
CCHCR1-219ENST00000505392 C11orf95C9JLR9 678 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-219ENST00000505392 PLSCR1O15162 318 aa17.02■□□□□ 0.32
CCHCR1-219ENST00000505392 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
CCHCR1-219ENST00000505392 CRYBG1Q9Y4K1 1723 aa17.01■□□□□ 0.31
CCHCR1-219ENST00000505392 CAMTA1Q9Y6Y1 1673 aa17.01■□□□□ 0.31
CCHCR1-219ENST00000505392 GCP02774 474 aa17■□□□□ 0.31
CCHCR1-219ENST00000505392 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 RREB1Q92766 1687 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 CPDO75976 1380 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 ATP7BP35670 1465 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
CCHCR1-219ENST00000505392 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 BCL11BQ9C0K0 894 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
CCHCR1-219ENST00000505392 DDB1Q16531 1140 aa16.97■□□□□ 0.31
CCHCR1-219ENST00000505392 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
CCHCR1-219ENST00000505392 PROM2Q8N271 834 aa16.97■□□□□ 0.31
CCHCR1-219ENST00000505392 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-219ENST00000505392 USP19O94966 1318 aa16.96■□□□□ 0.3
CCHCR1-219ENST00000505392 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-219ENST00000505392 PTGER2P43116 358 aa16.94■□□□□ 0.3
CCHCR1-219ENST00000505392 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
CCHCR1-219ENST00000505392 OVOS2A0A0G2JMS6 1433 aa16.94■□□□□ 0.3
CCHCR1-219ENST00000505392 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
CCHCR1-219ENST00000505392 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
CCHCR1-219ENST00000505392 CRB1P82279 1406 aa16.93■□□□□ 0.3
CCHCR1-219ENST00000505392 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
CCHCR1-219ENST00000505392 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-219ENST00000505392 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
CCHCR1-219ENST00000505392 NLRP6P59044 892 aa16.91■□□□□ 0.3
CCHCR1-219ENST00000505392 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-219ENST00000505392 FHDC1Q9C0D6 1143 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-219ENST00000505392 STK32BQ9NY57 414 aa16.91■□□□□ 0.3
CCHCR1-219ENST00000505392 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
CCHCR1-219ENST00000505392 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
CCHCR1-219ENST00000505392 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.3
CCHCR1-219ENST00000505392 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
CCHCR1-219ENST00000505392 SLC15A2Q16348 729 aa16.89■□□□□ 0.29
CCHCR1-219ENST00000505392 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
CCHCR1-219ENST00000505392 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
CCHCR1-219ENST00000505392 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
CCHCR1-219ENST00000505392 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
CCHCR1-219ENST00000505392 AATKQ6ZMQ8 1374 aa16.88■□□□□ 0.29
CCHCR1-219ENST00000505392 UTRNP46939 3433 aa16.87■□□□□ 0.29
CCHCR1-219ENST00000505392 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms