RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 CHIC2Q9UKJ5 165 aa12.23□□□□□ -0.45
CASC9-201ENST00000504531 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
CASC9-201ENST00000504531 ATP10BO94823 1461 aa12.22□□□□□ -0.45
CASC9-201ENST00000504531 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
CASC9-201ENST00000504531 PZPP20742 1482 aa12.21□□□□□ -0.45
CASC9-201ENST00000504531 KIAA1107Q9UPP5 1409 aa12.21□□□□□ -0.45
CASC9-201ENST00000504531 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
CASC9-201ENST00000504531 ZMYND10O75800 440 aa12.21□□□□□ -0.45
CASC9-201ENST00000504531 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
CASC9-201ENST00000504531 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 DNAJB2P25686 324 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 MYT1Q01538 1121 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
CASC9-201ENST00000504531 ADGRL1O94910 1474 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 ASXL2Q76L83 1435 aa12.2□□□□□ -0.46
CASC9-201ENST00000504531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
CASC9-201ENST00000504531 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
CASC9-201ENST00000504531 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
CASC9-201ENST00000504531 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
CASC9-201ENST00000504531 METTL3Q86U44 580 aaKnown RBP12.19□□□□□ -0.46
CASC9-201ENST00000504531 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.19□□□□□ -0.46
CASC9-201ENST00000504531 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
CASC9-201ENST00000504531 IRF6O14896 467 aa12.18□□□□□ -0.46
CASC9-201ENST00000504531 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
CASC9-201ENST00000504531 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
CASC9-201ENST00000504531 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
CASC9-201ENST00000504531 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
CASC9-201ENST00000504531 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
CASC9-201ENST00000504531 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
CASC9-201ENST00000504531 ARHGEF12Q9NZN5 1544 aa12.17□□□□□ -0.46
CASC9-201ENST00000504531 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
CASC9-201ENST00000504531 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
CASC9-201ENST00000504531 WASHC2AQ641Q2 1341 aa12.16□□□□□ -0.46
CASC9-201ENST00000504531 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
CASC9-201ENST00000504531 RCCD1A6NED2 376 aa12.16□□□□□ -0.46
CASC9-201ENST00000504531 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
CASC9-201ENST00000504531 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
CASC9-201ENST00000504531 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
CASC9-201ENST00000504531 ABCC2Q92887 1545 aa12.15□□□□□ -0.46
CASC9-201ENST00000504531 CCDC7Q96M83 1385 aa12.15□□□□□ -0.46
CASC9-201ENST00000504531 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 C9orf84Q5VXU9 1444 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
CASC9-201ENST00000504531 BCAMP50895 628 aa12.13□□□□□ -0.47
CASC9-201ENST00000504531 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
CASC9-201ENST00000504531 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
CASC9-201ENST00000504531 TSR3Q9UJK0 312 aaKnown RBP12.13□□□□□ -0.47
CASC9-201ENST00000504531 PREX2Q70Z35 1606 aa12.12□□□□□ -0.47
CASC9-201ENST00000504531 PTPN5P54829 565 aa12.12□□□□□ -0.47
CASC9-201ENST00000504531 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
CASC9-201ENST00000504531 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
CASC9-201ENST00000504531 COL17A1Q9UMD9 1497 aaPredicted RBP12.12□□□□□ -0.47
CASC9-201ENST00000504531 CCDC141Q6ZP82 1450 aa12.11□□□□□ -0.47
CASC9-201ENST00000504531 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
CASC9-201ENST00000504531 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
CASC9-201ENST00000504531 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
CASC9-201ENST00000504531 HPS5Q9UPZ3 1129 aa12.1□□□□□ -0.47
CASC9-201ENST00000504531 KTN1Q86UP2 1357 aaKnown RBP12.09□□□□□ -0.47
CASC9-201ENST00000504531 RNF40O75150 1001 aa12.09□□□□□ -0.47
CASC9-201ENST00000504531 PPP4CP60510 307 aa12.09□□□□□ -0.47
CASC9-201ENST00000504531 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.47
CASC9-201ENST00000504531 NEFLP07196 543 aa12.08□□□□□ -0.48
CASC9-201ENST00000504531 HECW2Q9P2P5 1572 aa12.08□□□□□ -0.48
CASC9-201ENST00000504531 CDC42BPBQ9Y5S2 1711 aa12.08□□□□□ -0.48
CASC9-201ENST00000504531 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
CASC9-201ENST00000504531 HIRIP3Q9BW71 556 aaPredicted RBP12.07□□□□□ -0.48
CASC9-201ENST00000504531 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
CASC9-201ENST00000504531 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
CASC9-201ENST00000504531 ATP10AO60312 1499 aa12.07□□□□□ -0.48
CASC9-201ENST00000504531 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
CASC9-201ENST00000504531 KIF15Q9NS87 1388 aa12.06□□□□□ -0.48
CASC9-201ENST00000504531 GLI2P10070 1586 aa12.06□□□□□ -0.48
CASC9-201ENST00000504531 AK7Q96M32 723 aa12.06□□□□□ -0.48
CASC9-201ENST00000504531 NUP155O75694 1391 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 UNC13BO14795 1591 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 PHOX2BQ99453 314 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 KDM5CP41229 1560 aa12.05□□□□□ -0.48
CASC9-201ENST00000504531 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
CASC9-201ENST00000504531 KIF7Q2M1P5 1343 aa12.04□□□□□ -0.48
CASC9-201ENST00000504531 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
CASC9-201ENST00000504531 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
CASC9-201ENST00000504531 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
CASC9-201ENST00000504531 LAMC1P11047 1609 aa12.03□□□□□ -0.48
CASC9-201ENST00000504531 CLCN1P35523 988 aa12.02□□□□□ -0.49
CASC9-201ENST00000504531 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
CASC9-201ENST00000504531 USP47Q96K76 1375 aa12.02□□□□□ -0.49
CASC9-201ENST00000504531 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
CASC9-201ENST00000504531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC9-201ENST00000504531 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
CASC9-201ENST00000504531 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
CASC9-201ENST00000504531 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms