RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 GPT2Q8TD30 523 aa16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 NUCB2P80303 420 aa16.07■□□□□ 0.16
GAPVD1-220ENST00000497580 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
GAPVD1-220ENST00000497580 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
GAPVD1-220ENST00000497580 CGNQ9P2M7 1197 aaKnown RBP16.06■□□□□ 0.16
GAPVD1-220ENST00000497580 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
GAPVD1-220ENST00000497580 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 ZNF771Q7L3S4 317 aaPredicted RBP16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 APBB1O00213 710 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 CLASP1Q7Z460 1538 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 MTHFSP49914 203 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 NUCB1Q02818 461 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 ABCC2Q92887 1545 aa16.05■□□□□ 0.16
GAPVD1-220ENST00000497580 GTF2E1P29083 439 aaPredicted RBP16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 MYRIPQ8NFW9 859 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 CFAP70Q5T0N1 1121 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
GAPVD1-220ENST00000497580 PRDM15P57071 1507 aaPredicted RBP16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 ZBTB22O15209 634 aa16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
GAPVD1-220ENST00000497580 MCM5P33992 734 aa16.02■□□□□ 0.16
GAPVD1-220ENST00000497580 AFAP1Q8N556 730 aa16.02■□□□□ 0.16
GAPVD1-220ENST00000497580 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
GAPVD1-220ENST00000497580 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
GAPVD1-220ENST00000497580 CFAP53Q96M91 514 aa16.02■□□□□ 0.15
GAPVD1-220ENST00000497580 STAC3Q96MF2 364 aa16.02■□□□□ 0.15
GAPVD1-220ENST00000497580 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.15
GAPVD1-220ENST00000497580 CHD1O14646 1710 aa16.01■□□□□ 0.15
GAPVD1-220ENST00000497580 U2AF2P26368 475 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■□□ 16.1
GAPVD1-220ENST00000497580 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
GAPVD1-220ENST00000497580 USP25Q9UHP3 1055 aa16.01■□□□□ 0.15
GAPVD1-220ENST00000497580 GDPD2Q9HCC8 539 aa16.01■□□□□ 0.15
GAPVD1-220ENST00000497580 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
GAPVD1-220ENST00000497580 TSPY26PQ9H489 355 aa16■□□□□ 0.15
GAPVD1-220ENST00000497580 NOLC1Q14978 699 aaKnown RBP eCLIP15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 CDC45O75419 566 aa15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 RAPGEF6Q8TEU7 1601 aa15.99■□□□□ 0.15
GAPVD1-220ENST00000497580 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
GAPVD1-220ENST00000497580 RABEP1Q15276 862 aa15.98■□□□□ 0.15
GAPVD1-220ENST00000497580 BCL2L12Q9HB09 334 aa15.98■□□□□ 0.15
GAPVD1-220ENST00000497580 KIF3BO15066 747 aa15.98■□□□□ 0.15
GAPVD1-220ENST00000497580 SLC12A5Q9H2X9 1139 aa15.98■□□□□ 0.15
GAPVD1-220ENST00000497580 HMGN5P82970 282 aaKnown RBP15.97■□□□□ 0.15
GAPVD1-220ENST00000497580 LETM1O95202 739 aaPredicted RBP15.97■□□□□ 0.15
GAPVD1-220ENST00000497580 KIF20AO95235 890 aa15.97■□□□□ 0.15
GAPVD1-220ENST00000497580 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
GAPVD1-220ENST00000497580 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
GAPVD1-220ENST00000497580 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
GAPVD1-220ENST00000497580 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
GAPVD1-220ENST00000497580 PTPRGP23470 1445 aa15.96■□□□□ 0.15
GAPVD1-220ENST00000497580 ST18O60284 1047 aa15.96■□□□□ 0.15
GAPVD1-220ENST00000497580 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
GAPVD1-220ENST00000497580 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
GAPVD1-220ENST00000497580 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
GAPVD1-220ENST00000497580 CLEC17AQ6ZS10 378 aa15.94■□□□□ 0.14
GAPVD1-220ENST00000497580 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
GAPVD1-220ENST00000497580 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
GAPVD1-220ENST00000497580 STK26Q9P289 416 aa15.93■□□□□ 0.14
GAPVD1-220ENST00000497580 ZDHHC9Q9Y397 364 aa15.93■□□□□ 0.14
GAPVD1-220ENST00000497580 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
GAPVD1-220ENST00000497580 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 ADCY5O95622 1261 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 ATP10BO94823 1461 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 SCAPERQ9BY12 1400 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 MBD3O95983 291 aa15.92■□□□□ 0.14
GAPVD1-220ENST00000497580 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 ADCY10Q96PN6 1610 aa15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 RIOK3O14730 519 aaKnown RBP15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 GSPT1P15170 499 aaKnown RBP15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
GAPVD1-220ENST00000497580 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 SCAF11Q99590 1463 aaKnown RBP15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 CWC22Q9HCG8 908 aaKnown RBP15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 TMEM51Q9NW97 253 aa15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 CYP2E1P05181 493 aaPredicted RBP15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 NEK4P51957 841 aa15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 GGT6Q6P531 493 aa15.9■□□□□ 0.14
GAPVD1-220ENST00000497580 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
GAPVD1-220ENST00000497580 GADD45BO75293 160 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms