RNA–Protein interactions for RNA: ENST00000497155.1

USP13-204, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-204ENST00000497155 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
USP13-204ENST00000497155 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
USP13-204ENST00000497155 BEGAINQ9BUH8 593 aa9.08□□□□□ -0.96
USP13-204ENST00000497155 AXIN1O15169 862 aa9.07□□□□□ -0.96
USP13-204ENST00000497155 MS4A1P11836 297 aa9.07□□□□□ -0.96
USP13-204ENST00000497155 RC3H1Q5TC82 1133 aaKnown RBP9.07□□□□□ -0.96
USP13-204ENST00000497155 ZNF608Q9ULD9 1512 aaPredicted RBP9.06□□□□□ -0.96
USP13-204ENST00000497155 GPBP1L1Q9HC44 474 aaPredicted RBP9.06□□□□□ -0.96
USP13-204ENST00000497155 GMPR2Q9P2T1 348 aaKnown RBP9.06□□□□□ -0.96
USP13-204ENST00000497155 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
USP13-204ENST00000497155 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
USP13-204ENST00000497155 WNT7BP56706 349 aa9.04□□□□□ -0.96
USP13-204ENST00000497155 PRR7Q8TB68 274 aa9.04□□□□□ -0.96
USP13-204ENST00000497155 HPS1Q92902 700 aa9.04□□□□□ -0.96
USP13-204ENST00000497155 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
USP13-204ENST00000497155 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
USP13-204ENST00000497155 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
USP13-204ENST00000497155 TOPBP1Q92547 1522 aa9.03□□□□□ -0.96
USP13-204ENST00000497155 CCNYL3P0C7X3 344 aa9.02□□□□□ -0.97
USP13-204ENST00000497155 MTMR2Q13614 643 aa9.02□□□□□ -0.97
USP13-204ENST00000497155 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
USP13-204ENST00000497155 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
USP13-204ENST00000497155 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
USP13-204ENST00000497155 PTPRNQ16849 979 aa9.01□□□□□ -0.97
USP13-204ENST00000497155 ALDH1A1P00352 501 aa9□□□□□ -0.97
USP13-204ENST00000497155 SH3BP2P78314 561 aa9□□□□□ -0.97
USP13-204ENST00000497155 LINC01559Q495D7 138 aa9□□□□□ -0.97
USP13-204ENST00000497155 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
USP13-204ENST00000497155 SIAH2O43255 324 aa8.99□□□□□ -0.97
USP13-204ENST00000497155 EVA1BQ9NVM1 165 aa8.99□□□□□ -0.97
USP13-204ENST00000497155 C11orf95C9JLR9 678 aaPredicted RBP8.98□□□□□ -0.97
USP13-204ENST00000497155 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
USP13-204ENST00000497155 KCNH2Q12809 1159 aa8.98□□□□□ -0.97
USP13-204ENST00000497155 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
USP13-204ENST00000497155 BAP1Q92560 729 aa8.98□□□□□ -0.97
USP13-204ENST00000497155 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
USP13-204ENST00000497155 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.973e-8■■■□□ 18
USP13-204ENST00000497155 SPTLC1O15269 473 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 HRCP23327 699 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 EIF4G3O43432 1585 aaKnown RBP8.97□□□□□ -0.97
USP13-204ENST00000497155 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 RIMBP3CA6NJZ7 1639 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 RIMBP3BA6NNM3 1639 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 RIMBP3Q9UFD9 1639 aa8.97□□□□□ -0.97
USP13-204ENST00000497155 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
USP13-204ENST00000497155 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
USP13-204ENST00000497155 RIC3Q7Z5B4 369 aa8.96□□□□□ -0.98
USP13-204ENST00000497155 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
USP13-204ENST00000497155 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
USP13-204ENST00000497155 GJA5P36382 358 aa8.95□□□□□ -0.98
USP13-204ENST00000497155 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
USP13-204ENST00000497155 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
USP13-204ENST00000497155 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
USP13-204ENST00000497155 DIXDC1Q155Q3 683 aa8.94□□□□□ -0.98
USP13-204ENST00000497155 LCE2AQ5TA79 106 aaPredicted RBP8.94□□□□□ -0.98
USP13-204ENST00000497155 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
USP13-204ENST00000497155 ABCC8Q09428 1581 aa8.94□□□□□ -0.98
USP13-204ENST00000497155 CTHP32929 405 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 TREML4Q6UXN2 200 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 TLL2Q9Y6L7 1015 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
USP13-204ENST00000497155 TARBP1Q13395 1621 aaKnown RBP8.93□□□□□ -0.98
USP13-204ENST00000497155 QPCTQ16769 361 aa8.92□□□□□ -0.98
USP13-204ENST00000497155 MYSM1Q5VVJ2 828 aa8.92□□□□□ -0.98
USP13-204ENST00000497155 IL27Q8NEV9 243 aa8.92□□□□□ -0.98
USP13-204ENST00000497155 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
USP13-204ENST00000497155 PLEKHG3A1L390 1219 aa8.91□□□□□ -0.98
USP13-204ENST00000497155 CYB5RLQ6IPT4 315 aa8.91□□□□□ -0.98
USP13-204ENST00000497155 WASF2Q9Y6W5 498 aa8.91□□□□□ -0.98
USP13-204ENST00000497155 PER1O15534 1290 aaPredicted RBP8.9□□□□□ -0.98
USP13-204ENST00000497155 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
USP13-204ENST00000497155 BMP1P13497 986 aa8.9□□□□□ -0.98
USP13-204ENST00000497155 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
USP13-204ENST00000497155 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
USP13-204ENST00000497155 TRIM47Q96LD4 638 aa8.9□□□□□ -0.98
USP13-204ENST00000497155 CHD1O14646 1710 aa8.9□□□□□ -0.98
USP13-204ENST00000497155 TSC1Q92574 1164 aa8.89□□□□□ -0.99
USP13-204ENST00000497155 FOXJ1Q92949 421 aa8.89□□□□□ -0.99
USP13-204ENST00000497155 SOGA1O94964 1423 aa8.88□□□□□ -0.99
USP13-204ENST00000497155 TRIM46Q7Z4K8 759 aa8.88□□□□□ -0.99
USP13-204ENST00000497155 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
USP13-204ENST00000497155 CUX1P39880 1505 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 LILRB3O75022 631 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
USP13-204ENST00000497155 NFX1Q12986 1120 aaKnown RBP8.87□□□□□ -0.99
USP13-204ENST00000497155 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 ARAP1Q96P48 1450 aa8.87□□□□□ -0.99
USP13-204ENST00000497155 NUTM2BA6NNL0 878 aaPredicted RBP8.86□□□□□ -0.99
USP13-204ENST00000497155 NUTM2EB1AL46 878 aaPredicted RBP8.86□□□□□ -0.99
USP13-204ENST00000497155 CAPN5O15484 640 aaPredicted RBP8.86□□□□□ -0.99
USP13-204ENST00000497155 WFS1O76024 890 aa8.86□□□□□ -0.99
USP13-204ENST00000497155 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
USP13-204ENST00000497155 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms