RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 SLC24A1O60721 1099 aa8.67□□□□□ -1.02
HMGCL-206ENST00000496907 CLTCL1P53675 1640 aa8.67□□□□□ -1.02
HMGCL-206ENST00000496907 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
HMGCL-206ENST00000496907 METRNQ9UJH8 293 aa8.67□□□□□ -1.02
HMGCL-206ENST00000496907 CAMTA1Q9Y6Y1 1673 aa8.67□□□□□ -1.02
HMGCL-206ENST00000496907 KIF1BO60333 1816 aa8.66□□□□□ -1.02
HMGCL-206ENST00000496907 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
HMGCL-206ENST00000496907 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
HMGCL-206ENST00000496907 ZNF692Q9BU19 519 aaPredicted RBP8.66□□□□□ -1.02
HMGCL-206ENST00000496907 NALCNQ8IZF0 1738 aa8.66□□□□□ -1.02
HMGCL-206ENST00000496907 MYOM2P54296 1465 aa8.65□□□□□ -1.02
HMGCL-206ENST00000496907 ADGRF5Q8IZF2 1346 aa8.65□□□□□ -1.02
HMGCL-206ENST00000496907 PPP1R1BQ9UD71 204 aaPredicted RBP8.65□□□□□ -1.02
HMGCL-206ENST00000496907 ATRNO75882 1429 aa8.64□□□□□ -1.03
HMGCL-206ENST00000496907 NEXMIFQ5QGS0 1516 aa8.64□□□□□ -1.03
HMGCL-206ENST00000496907 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
HMGCL-206ENST00000496907 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
HMGCL-206ENST00000496907 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
HMGCL-206ENST00000496907 NRXN3Q9Y4C0 1643 aa8.62□□□□□ -1.03
HMGCL-206ENST00000496907 GIGYF1O75420 1035 aaPredicted RBP8.62□□□□□ -1.03
HMGCL-206ENST00000496907 ZEB1P37275 1124 aaPredicted RBP8.62□□□□□ -1.03
HMGCL-206ENST00000496907 BAG6P46379 1132 aa8.62□□□□□ -1.03
HMGCL-206ENST00000496907 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
HMGCL-206ENST00000496907 NRXN1Q9ULB1 1477 aa8.62□□□□□ -1.03
HMGCL-206ENST00000496907 PIK3C2GO75747 1445 aa8.62□□□□□ -1.03
HMGCL-206ENST00000496907 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
HMGCL-206ENST00000496907 UTRNP46939 3433 aa8.61□□□□□ -1.03
HMGCL-206ENST00000496907 FNBP4Q8N3X1 1017 aaPredicted RBP8.61□□□□□ -1.03
HMGCL-206ENST00000496907 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
HMGCL-206ENST00000496907 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
HMGCL-206ENST00000496907 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
HMGCL-206ENST00000496907 C1orf167Q5SNV9 1468 aa8.6□□□□□ -1.03
HMGCL-206ENST00000496907 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
HMGCL-206ENST00000496907 LAMC1P11047 1609 aa8.6□□□□□ -1.03
HMGCL-206ENST00000496907 COL22A1Q8NFW1 1626 aaPredicted RBP8.6□□□□□ -1.03
HMGCL-206ENST00000496907 METP08581 1390 aa8.6□□□□□ -1.03
HMGCL-206ENST00000496907 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
HMGCL-206ENST00000496907 ORAI2Q96SN7 254 aa8.59□□□□□ -1.03
HMGCL-206ENST00000496907 POGKQ9P215 609 aa8.59□□□□□ -1.03
HMGCL-206ENST00000496907 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
HMGCL-206ENST00000496907 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
HMGCL-206ENST00000496907 C7P10643 843 aa8.58□□□□□ -1.04
HMGCL-206ENST00000496907 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
HMGCL-206ENST00000496907 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
HMGCL-206ENST00000496907 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
HMGCL-206ENST00000496907 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
HMGCL-206ENST00000496907 STK26Q9P289 416 aa8.57□□□□□ -1.04
HMGCL-206ENST00000496907 ROCK2O75116 1388 aaKnown RBP8.57□□□□□ -1.04
HMGCL-206ENST00000496907 EIF3AQ14152 1382 aaKnown RBP8.57□□□□□ -1.04
HMGCL-206ENST00000496907 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
HMGCL-206ENST00000496907 GLI3P10071 1580 aa8.56□□□□□ -1.04
HMGCL-206ENST00000496907 TECPR2O15040 1411 aa8.56□□□□□ -1.04
HMGCL-206ENST00000496907 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
HMGCL-206ENST00000496907 PPLO60437 1756 aa8.56□□□□□ -1.04
HMGCL-206ENST00000496907 TRAK1Q9UPV9 953 aa8.56□□□□□ -1.04
HMGCL-206ENST00000496907 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
HMGCL-206ENST00000496907 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
HMGCL-206ENST00000496907 NBPF8Q3BBV2 869 aa8.55□□□□□ -1.04
HMGCL-206ENST00000496907 SEPT12Q8IYM1 358 aa8.55□□□□□ -1.04
HMGCL-206ENST00000496907 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
HMGCL-206ENST00000496907 NINLQ9Y2I6 1382 aa8.55□□□□□ -1.04
HMGCL-206ENST00000496907 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 A0A0G2JS52 829 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 MYT1Q01538 1121 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 EZH2Q15910 746 aaKnown RBP8.54□□□□□ -1.04
HMGCL-206ENST00000496907 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-206ENST00000496907 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-206ENST00000496907 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 PUS7Q96PZ0 661 aaKnown RBP8.54□□□□□ -1.04
HMGCL-206ENST00000496907 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
HMGCL-206ENST00000496907 PXDNQ92626 1479 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 ROBO2Q9HCK4 1378 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 KRT27Q7Z3Y8 459 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 CCDC9Q9Y3X0 531 aaKnown RBP8.53□□□□□ -1.04
HMGCL-206ENST00000496907 IFT172Q9UG01 1749 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 DLC1Q96QB1 1528 aa8.53□□□□□ -1.04
HMGCL-206ENST00000496907 CENPJQ9HC77 1338 aaPredicted RBP8.53□□□□□ -1.04
HMGCL-206ENST00000496907 KIAA1210Q9ULL0 1709 aa8.52□□□□□ -1.05
HMGCL-206ENST00000496907 PRELPP51888 382 aa8.52□□□□□ -1.05
HMGCL-206ENST00000496907 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
HMGCL-206ENST00000496907 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGCL-206ENST00000496907 FAM182BQ5T319 152 aa8.52□□□□□ -1.05
HMGCL-206ENST00000496907 WAPLQ7Z5K2 1190 aa8.52□□□□□ -1.05
HMGCL-206ENST00000496907 SPON1Q9HCB6 807 aa8.52□□□□□ -1.05
HMGCL-206ENST00000496907 USP32Q8NFA0 1604 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 SLIT2O94813 1529 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 PLCH1Q4KWH8 1693 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 FOXO3O43524 673 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 CDC42BPGQ6DT37 1551 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 EVC2Q86UK5 1308 aa8.51□□□□□ -1.05
HMGCL-206ENST00000496907 CHD4Q14839 1912 aa8.5□□□□□ -1.05
HMGCL-206ENST00000496907 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
HMGCL-206ENST00000496907 WASLO00401 505 aaPredicted RBP8.5□□□□□ -1.05
HMGCL-206ENST00000496907 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
HMGCL-206ENST00000496907 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
HMGCL-206ENST00000496907 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms