RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.77
TFE3-205ENST00000495940 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
TFE3-205ENST00000495940 PHRF1Q9P1Y6 1649 aaKnown RBP19.82■□□□□ 0.76
TFE3-205ENST00000495940 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
TFE3-205ENST00000495940 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
TFE3-205ENST00000495940 PARD3Q8TEW0 1356 aa19.8■□□□□ 0.76
TFE3-205ENST00000495940 ANKRD30BQ9BXX2 1392 aa19.8■□□□□ 0.76
TFE3-205ENST00000495940 APBA3O96018 575 aa19.79■□□□□ 0.76
TFE3-205ENST00000495940 ANKARQ7Z5J8 1434 aa19.78■□□□□ 0.76
TFE3-205ENST00000495940 PPP1R1BQ9UD71 204 aaPredicted RBP19.77■□□□□ 0.76
TFE3-205ENST00000495940 SPATA31A1Q5TZJ5 1347 aa19.76■□□□□ 0.75
TFE3-205ENST00000495940 NRKQ7Z2Y5 1582 aa19.76■□□□□ 0.75
TFE3-205ENST00000495940 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
TFE3-205ENST00000495940 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
TFE3-205ENST00000495940 FAM196AQ6ZSG2 479 aa19.75■□□□□ 0.75
TFE3-205ENST00000495940 PRAM1Q96QH2 718 aa19.75■□□□□ 0.75
TFE3-205ENST00000495940 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
TFE3-205ENST00000495940 PRDM11Q9NQV5 511 aa19.74■□□□□ 0.75
TFE3-205ENST00000495940 MYOM1P52179 1685 aa19.73■□□□□ 0.75
TFE3-205ENST00000495940 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
TFE3-205ENST00000495940 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 DLC1Q96QB1 1528 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 SPON1Q9HCB6 807 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 STRN4Q9NRL3 753 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
TFE3-205ENST00000495940 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
TFE3-205ENST00000495940 GPRASP1Q5JY77 1395 aa19.71■□□□□ 0.75
TFE3-205ENST00000495940 CHRNA2Q15822 529 aa19.71■□□□□ 0.75
TFE3-205ENST00000495940 KCNQ2O43526 872 aa19.7■□□□□ 0.74
TFE3-205ENST00000495940 RGPD3A6NKT7 1758 aaPredicted RBP19.7■□□□□ 0.74
TFE3-205ENST00000495940 RGPD4Q7Z3J3 1758 aa19.7■□□□□ 0.74
TFE3-205ENST00000495940 UTRNP46939 3433 aa19.69■□□□□ 0.74
TFE3-205ENST00000495940 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
TFE3-205ENST00000495940 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
TFE3-205ENST00000495940 NBPF14Q5TI25 921 aa19.69■□□□□ 0.74
TFE3-205ENST00000495940 USP35Q9P2H5 1018 aa19.69■□□□□ 0.74
TFE3-205ENST00000495940 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
TFE3-205ENST00000495940 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
TFE3-205ENST00000495940 PARP4Q9UKK3 1724 aaKnown RBP19.68■□□□□ 0.74
TFE3-205ENST00000495940 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
TFE3-205ENST00000495940 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
TFE3-205ENST00000495940 C14orf93Q9H972 538 aaKnown RBP19.68■□□□□ 0.74
TFE3-205ENST00000495940 SBF2Q86WG5 1849 aa19.67■□□□□ 0.74
TFE3-205ENST00000495940 SSH2Q76I76 1423 aa19.67■□□□□ 0.74
TFE3-205ENST00000495940 LMO7Q8WWI1 1683 aa19.66■□□□□ 0.74
TFE3-205ENST00000495940 PEAK1Q9H792 1746 aa19.66■□□□□ 0.74
TFE3-205ENST00000495940 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
TFE3-205ENST00000495940 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
TFE3-205ENST00000495940 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
TFE3-205ENST00000495940 SENP3-EIF4A1A0A087X0R7 540 aa19.65■□□□□ 0.74
TFE3-205ENST00000495940 PDE3BQ13370 1112 aa19.64■□□□□ 0.73
TFE3-205ENST00000495940 POGKQ9P215 609 aa19.64■□□□□ 0.73
TFE3-205ENST00000495940 CHD4Q14839 1912 aa19.64■□□□□ 0.73
TFE3-205ENST00000495940 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
TFE3-205ENST00000495940 ANO8Q9HCE9 1232 aaPredicted RBP19.63■□□□□ 0.73
TFE3-205ENST00000495940 LRRC37A3O60309 1634 aa19.62■□□□□ 0.73
TFE3-205ENST00000495940 ZC3H6P61129 1189 aaKnown RBP19.62■□□□□ 0.73
TFE3-205ENST00000495940 PDGFDQ9GZP0 370 aaPredicted RBP19.61■□□□□ 0.73
TFE3-205ENST00000495940 ATP7BP35670 1465 aa19.6■□□□□ 0.73
TFE3-205ENST00000495940 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
TFE3-205ENST00000495940 NUTM2GQ5VZR2 741 aa19.6■□□□□ 0.73
TFE3-205ENST00000495940 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
TFE3-205ENST00000495940 NGDNQ8NEJ9 315 aaKnown RBP19.6■□□□□ 0.73
TFE3-205ENST00000495940 LARP1Q6PKG0 1096 aaKnown RBP19.59■□□□□ 0.73
TFE3-205ENST00000495940 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
TFE3-205ENST00000495940 WNK3Q9BYP7 1800 aa19.58■□□□□ 0.73
TFE3-205ENST00000495940 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.72
TFE3-205ENST00000495940 TRAK1Q9UPV9 953 aa19.57■□□□□ 0.72
TFE3-205ENST00000495940 ZBTB7AO95365 584 aa19.56■□□□□ 0.72
TFE3-205ENST00000495940 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
TFE3-205ENST00000495940 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
TFE3-205ENST00000495940 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
TFE3-205ENST00000495940 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
TFE3-205ENST00000495940 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
TFE3-205ENST00000495940 WASLO00401 505 aaPredicted RBP19.55■□□□□ 0.72
TFE3-205ENST00000495940 EVA1CP58658 441 aa19.55■□□□□ 0.72
TFE3-205ENST00000495940 IFFO2Q5TF58 517 aa19.55■□□□□ 0.72
TFE3-205ENST00000495940 TCP11L2Q8N4U5 519 aa19.55■□□□□ 0.72
TFE3-205ENST00000495940 C1QTNF8P60827 252 aa19.54■□□□□ 0.72
TFE3-205ENST00000495940 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
TFE3-205ENST00000495940 AKAP12Q02952 1782 aa19.54■□□□□ 0.72
TFE3-205ENST00000495940 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
TFE3-205ENST00000495940 PTGER2P43116 358 aa19.53■□□□□ 0.72
TFE3-205ENST00000495940 PTF1AQ7RTS3 328 aa19.52■□□□□ 0.72
TFE3-205ENST00000495940 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
TFE3-205ENST00000495940 FHDC1Q9C0D6 1143 aaPredicted RBP19.5■□□□□ 0.71
TFE3-205ENST00000495940 ATF5Q9Y2D1 282 aaPredicted RBP19.5■□□□□ 0.71
TFE3-205ENST00000495940 CPDO75976 1380 aa19.49■□□□□ 0.71
TFE3-205ENST00000495940 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
TFE3-205ENST00000495940 PLSCR1O15162 318 aa19.47■□□□□ 0.71
TFE3-205ENST00000495940 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
TFE3-205ENST00000495940 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
TFE3-205ENST00000495940 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
TFE3-205ENST00000495940 THRAP3Q9Y2W1 955 aaKnown RBP19.47■□□□□ 0.71
TFE3-205ENST00000495940 USP19O94966 1318 aa19.47■□□□□ 0.71
TFE3-205ENST00000495940 CRB1P82279 1406 aa19.46■□□□□ 0.71
TFE3-205ENST00000495940 SYT17Q9BSW7 474 aa19.46■□□□□ 0.71
TFE3-205ENST00000495940 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
TFE3-205ENST00000495940 PROM2Q8N271 834 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms