RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
COL1A1-209ENST00000495677 POGKQ9P215 609 aa20.03■□□□□ 0.8
COL1A1-209ENST00000495677 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL1A1-209ENST00000495677 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.8
COL1A1-209ENST00000495677 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
COL1A1-209ENST00000495677 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
COL1A1-209ENST00000495677 ADGRB1O14514 1584 aa20■□□□□ 0.79
COL1A1-209ENST00000495677 TULP4Q9NRJ4 1543 aa20■□□□□ 0.79
COL1A1-209ENST00000495677 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
COL1A1-209ENST00000495677 EZH2Q15910 746 aaKnown RBP19.99■□□□□ 0.79
COL1A1-209ENST00000495677 FAM182BQ5T319 152 aa19.99■□□□□ 0.79
COL1A1-209ENST00000495677 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
COL1A1-209ENST00000495677 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
COL1A1-209ENST00000495677 RREB1Q92766 1687 aa19.98■□□□□ 0.79
COL1A1-209ENST00000495677 SPATA31A1Q5TZJ5 1347 aa19.98■□□□□ 0.79
COL1A1-209ENST00000495677 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
COL1A1-209ENST00000495677 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-209ENST00000495677 PRDM11Q9NQV5 511 aa19.96■□□□□ 0.79
COL1A1-209ENST00000495677 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
COL1A1-209ENST00000495677 NUP188Q5SRE5 1749 aa19.93■□□□□ 0.78
COL1A1-209ENST00000495677 TRIM37O94972 964 aa19.93■□□□□ 0.78
COL1A1-209ENST00000495677 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
COL1A1-209ENST00000495677 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-209ENST00000495677 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
COL1A1-209ENST00000495677 BARGINQ6ZT62 677 aa19.92■□□□□ 0.78
COL1A1-209ENST00000495677 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
COL1A1-209ENST00000495677 APBA3O96018 575 aa19.91■□□□□ 0.78
COL1A1-209ENST00000495677 MINK1Q8N4C8 1332 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-209ENST00000495677 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
COL1A1-209ENST00000495677 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-209ENST00000495677 ATP7BP35670 1465 aa19.9■□□□□ 0.78
COL1A1-209ENST00000495677 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
COL1A1-209ENST00000495677 NBPF8Q3BBV2 869 aa19.87■□□□□ 0.77
COL1A1-209ENST00000495677 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
COL1A1-209ENST00000495677 SBF2Q86WG5 1849 aa19.86■□□□□ 0.77
COL1A1-209ENST00000495677 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
COL1A1-209ENST00000495677 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
COL1A1-209ENST00000495677 STRN4Q9NRL3 753 aa19.86■□□□□ 0.77
COL1A1-209ENST00000495677 PARP4Q9UKK3 1724 aaKnown RBP19.85■□□□□ 0.77
COL1A1-209ENST00000495677 LMO7Q8WWI1 1683 aa19.85■□□□□ 0.77
COL1A1-209ENST00000495677 C11orf95C9JLR9 678 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-209ENST00000495677 YY1P25490 414 aa19.85■□□□□ 0.77
COL1A1-209ENST00000495677 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
COL1A1-209ENST00000495677 THRAP3Q9Y2W1 955 aaKnown RBP19.85■□□□□ 0.77
COL1A1-209ENST00000495677 RGPD3A6NKT7 1758 aaPredicted RBP19.85■□□□□ 0.77
COL1A1-209ENST00000495677 RGPD4Q7Z3J3 1758 aa19.85■□□□□ 0.77
COL1A1-209ENST00000495677 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
COL1A1-209ENST00000495677 POLR3AO14802 1390 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-209ENST00000495677 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
COL1A1-209ENST00000495677 TOPAZ1Q8N9V7 1692 aa19.84■□□□□ 0.77
COL1A1-209ENST00000495677 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
COL1A1-209ENST00000495677 EVA1CP58658 441 aa19.83■□□□□ 0.77
COL1A1-209ENST00000495677 CPDO75976 1380 aa19.83■□□□□ 0.76
COL1A1-209ENST00000495677 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
COL1A1-209ENST00000495677 SPON1Q9HCB6 807 aa19.82■□□□□ 0.76
COL1A1-209ENST00000495677 NRKQ7Z2Y5 1582 aa19.81■□□□□ 0.76
COL1A1-209ENST00000495677 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
COL1A1-209ENST00000495677 KCNQ2O43526 872 aa19.8■□□□□ 0.76
COL1A1-209ENST00000495677 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
COL1A1-209ENST00000495677 USP35Q9P2H5 1018 aa19.8■□□□□ 0.76
COL1A1-209ENST00000495677 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
COL1A1-209ENST00000495677 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
COL1A1-209ENST00000495677 NINLQ9Y2I6 1382 aa19.79■□□□□ 0.76
COL1A1-209ENST00000495677 PEAK1Q9H792 1746 aa19.79■□□□□ 0.76
COL1A1-209ENST00000495677 ACEP12821 1306 aa19.78■□□□□ 0.76
COL1A1-209ENST00000495677 LARP1Q6PKG0 1096 aaKnown RBP19.78■□□□□ 0.76
COL1A1-209ENST00000495677 PLSCR1O15162 318 aa19.77■□□□□ 0.76
COL1A1-209ENST00000495677 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
COL1A1-209ENST00000495677 USP19O94966 1318 aa19.76■□□□□ 0.75
COL1A1-209ENST00000495677 DCAF8L1A6NGE4 600 aa19.76■□□□□ 0.75
COL1A1-209ENST00000495677 NUTM2GQ5VZR2 741 aa19.76■□□□□ 0.75
COL1A1-209ENST00000495677 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
COL1A1-209ENST00000495677 PPP1R1BQ9UD71 204 aaPredicted RBP19.75■□□□□ 0.75
COL1A1-209ENST00000495677 KIAA1210Q9ULL0 1709 aa19.75■□□□□ 0.75
COL1A1-209ENST00000495677 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
COL1A1-209ENST00000495677 NLRP13Q86W25 1043 aa19.74■□□□□ 0.75
COL1A1-209ENST00000495677 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-209ENST00000495677 GCP02774 474 aa19.73■□□□□ 0.75
COL1A1-209ENST00000495677 COL5A2P05997 1499 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-209ENST00000495677 CHD4Q14839 1912 aa19.72■□□□□ 0.75
COL1A1-209ENST00000495677 RAB3GAP2Q9H2M9 1393 aa19.71■□□□□ 0.75
COL1A1-209ENST00000495677 OVOS2A0A0G2JMS6 1433 aa19.71■□□□□ 0.75
COL1A1-209ENST00000495677 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
COL1A1-209ENST00000495677 CRB1P82279 1406 aa19.71■□□□□ 0.75
COL1A1-209ENST00000495677 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
COL1A1-209ENST00000495677 WNK3Q9BYP7 1800 aa19.7■□□□□ 0.74
COL1A1-209ENST00000495677 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
COL1A1-209ENST00000495677 COL18A1P39060 1754 aa19.69■□□□□ 0.74
COL1A1-209ENST00000495677 LRRC37A3O60309 1634 aa19.69■□□□□ 0.74
COL1A1-209ENST00000495677 BCL9O00512 1426 aa19.68■□□□□ 0.74
COL1A1-209ENST00000495677 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-209ENST00000495677 AATKQ6ZMQ8 1374 aa19.67■□□□□ 0.74
COL1A1-209ENST00000495677 DDB1Q16531 1140 aa19.65■□□□□ 0.74
COL1A1-209ENST00000495677 RGPD5Q99666 1765 aa19.65■□□□□ 0.74
COL1A1-209ENST00000495677 PROM2Q8N271 834 aa19.64■□□□□ 0.73
COL1A1-209ENST00000495677 SLIT3O75094 1523 aa19.64■□□□□ 0.73
COL1A1-209ENST00000495677 PPIP5K1Q6PFW1 1433 aa19.63■□□□□ 0.73
COL1A1-209ENST00000495677 ANO8Q9HCE9 1232 aaPredicted RBP19.63■□□□□ 0.73
COL1A1-209ENST00000495677 CDCA7Q9BWT1 371 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-209ENST00000495677 MYOM1P52179 1685 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms