RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 SLC27A5Q9Y2P5 690 aa5.63□□□□□ -1.51
COPS3-211ENST00000495640 LCE2BO14633 110 aa5.62□□□□□ -1.51
COPS3-211ENST00000495640 BCAMP50895 628 aa5.62□□□□□ -1.51
COPS3-211ENST00000495640 KANK4Q5T7N3 995 aaPredicted RBP5.62□□□□□ -1.51
COPS3-211ENST00000495640 SOWAHBA6NEL2 793 aa5.61□□□□□ -1.51
COPS3-211ENST00000495640 ACTN4O43707 911 aaKnown RBP5.61□□□□□ -1.51
COPS3-211ENST00000495640 ATP9BO43861 1147 aa5.61□□□□□ -1.51
COPS3-211ENST00000495640 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
COPS3-211ENST00000495640 FBXO45P0C2W1 286 aa5.61□□□□□ -1.51
COPS3-211ENST00000495640 HDGFP51858 240 aaKnown RBP5.61□□□□□ -1.51
COPS3-211ENST00000495640 PUS10Q3MIT2 529 aaKnown RBP5.61□□□□□ -1.51
COPS3-211ENST00000495640 SLC4A3P48751 1232 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 NR1H3Q13133 447 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 SEMA3FQ13275 785 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
COPS3-211ENST00000495640 CDCA8Q53HL2 280 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 BLOC1S3Q6QNY0 202 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 RNF19BQ6ZMZ0 732 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 ANKK1Q8NFD2 765 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 ZFRQ96KR1 1074 aaKnown RBP5.6□□□□□ -1.51
COPS3-211ENST00000495640 VRTNQ9H8Y1 702 aa5.6□□□□□ -1.51
COPS3-211ENST00000495640 PIK3CDO00329 1044 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 EIF4G2P78344 907 aaKnown RBP eCLIP5.59□□□□□ -1.51
COPS3-211ENST00000495640 KMT5BQ4FZB7 885 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 FOXD4L5Q5VV16 416 aaPredicted RBP5.59□□□□□ -1.51
COPS3-211ENST00000495640 FOXD4L4Q8WXT5 416 aaPredicted RBP5.59□□□□□ -1.51
COPS3-211ENST00000495640 ZNF428Q96B54 188 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 WBP1LQ9NX94 342 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 ZMIZ1Q9ULJ6 1067 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 SALL2Q9Y467 1007 aaPredicted RBP5.59□□□□□ -1.51
COPS3-211ENST00000495640 IVNS1ABPQ9Y6Y0 642 aa5.59□□□□□ -1.51
COPS3-211ENST00000495640 Q3C1V9 767 aa5.58□□□□□ -1.52
COPS3-211ENST00000495640 BRICD5Q6PL45 260 aa5.58□□□□□ -1.52
COPS3-211ENST00000495640 NFATC2IPQ8NCF5 419 aa5.58□□□□□ -1.52
COPS3-211ENST00000495640 THAP11Q96EK4 314 aa5.58□□□□□ -1.52
COPS3-211ENST00000495640 GNEQ9Y223 722 aaKnown RBP5.58□□□□□ -1.52
COPS3-211ENST00000495640 ZBBXA8MT70 800 aa5.57□□□□□ -1.52
COPS3-211ENST00000495640 RNF40O75150 1001 aa5.57□□□□□ -1.52
COPS3-211ENST00000495640 SND1Q7KZF4 910 aaKnown RBP eCLIP5.57□□□□□ -1.52
COPS3-211ENST00000495640 PNMA1Q8ND90 353 aa5.57□□□□□ -1.52
COPS3-211ENST00000495640 USB1Q9BQ65 265 aaKnown RBP5.57□□□□□ -1.52
COPS3-211ENST00000495640 OCSTAMPQ9BR26 566 aa5.57□□□□□ -1.52
COPS3-211ENST00000495640 FKBPLQ9UIM3 349 aa5.57□□□□□ -1.52
COPS3-211ENST00000495640 ZC3H4Q9UPT8 1303 aaKnown RBP5.56□□□□□ -1.52
COPS3-211ENST00000495640 TMEM164Q5U3C3 297 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 PHLDB3Q6NSJ2 640 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 PLEKHM2Q8IWE5 1019 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 FAM174AQ8TBP5 190 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 STK32AQ8WU08 396 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 MAP10Q9P2G4 905 aa5.56□□□□□ -1.52
COPS3-211ENST00000495640 USP17L3A6NCW0 530 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 USP17L4A6NCW7 530 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 PTPRNQ16849 979 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 USP17L2Q6R6M4 530 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 NYAP1Q6ZVC0 841 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 USP17L1Q7RTZ2 530 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 SCUBE3Q8IX30 993 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 SLAIN2Q9P270 581 aa5.55□□□□□ -1.52
COPS3-211ENST00000495640 FAM196BA6NMK8 535 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 USP17L5A8MUK1 530 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 APLP1P51693 650 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 FAM69CQ0P6D2 419 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 CRTC2Q53ET0 693 aaPredicted RBP5.54□□□□□ -1.52
COPS3-211ENST00000495640 TXNDC2Q86VQ3 553 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 PHTF2Q8N3S3 785 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 LRCH3Q96II8 777 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.54□□□□□ -1.52
COPS3-211ENST00000495640 CHIC2Q9UKJ5 165 aa5.54□□□□□ -1.52
COPS3-211ENST00000495640 JUNDP17535 347 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 KCNC4Q03721 635 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 CCDC27Q2M243 656 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 Q6ZNB5 142 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 PRR14Q9BWN1 585 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 NOVA2Q9UNW9 492 aaKnown RBP5.53□□□□□ -1.52
COPS3-211ENST00000495640 AMOTL2Q9Y2J4 779 aa5.53□□□□□ -1.52
COPS3-211ENST00000495640 SKIP12755 728 aa5.52□□□□□ -1.53
COPS3-211ENST00000495640 RBM25P49756 843 aaKnown RBP5.52□□□□□ -1.53
COPS3-211ENST00000495640 PTK7Q13308 1070 aa5.52□□□□□ -1.53
COPS3-211ENST00000495640 DEPDC4Q8N2C3 294 aa5.52□□□□□ -1.53
COPS3-211ENST00000495640 CEP126Q9P2H0 1117 aa5.52□□□□□ -1.53
COPS3-211ENST00000495640 GPSM3Q9Y4H4 160 aa5.52□□□□□ -1.53
COPS3-211ENST00000495640 USP17L15C9J2P7 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L13C9JLJ4 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L12C9JPN9 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L11C9JVI0 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L21D6R901 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L18D6R9N7 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L22D6RA61 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L17D6RBQ6 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L19D6RCP7 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L20D6RJB6 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 DXOO77932 396 aaKnown RBP5.51□□□□□ -1.53
COPS3-211ENST00000495640 FMNL1O95466 1100 aaPredicted RBP5.51□□□□□ -1.53
COPS3-211ENST00000495640 SSFA2P28290 1259 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 USP17L24Q0WX57 530 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 MSS51Q4VC12 460 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 EVA1BQ9NVM1 165 aa5.51□□□□□ -1.53
COPS3-211ENST00000495640 TSR3Q9UJK0 312 aaKnown RBP5.51□□□□□ -1.53
COPS3-211ENST00000495640 HPS5Q9UPZ3 1129 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms