RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ADGRF5Q8IZF2 1346 aa14.83□□□□□ -0.04
RFC4-214ENST00000494047 CFAP70Q5T0N1 1121 aa14.83□□□□□ -0.04
RFC4-214ENST00000494047 RUNDC1Q96C34 613 aa14.83□□□□□ -0.04
RFC4-214ENST00000494047 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
RFC4-214ENST00000494047 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
RFC4-214ENST00000494047 MSH6P52701 1360 aa14.82□□□□□ -0.04
RFC4-214ENST00000494047 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
RFC4-214ENST00000494047 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
RFC4-214ENST00000494047 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
RFC4-214ENST00000494047 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
RFC4-214ENST00000494047 AMOTL2Q9Y2J4 779 aa14.81□□□□□ -0.04
RFC4-214ENST00000494047 MORC1Q86VD1 984 aa14.8□□□□□ -0.04
RFC4-214ENST00000494047 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
RFC4-214ENST00000494047 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
RFC4-214ENST00000494047 ATAD2Q6PL18 1390 aa14.8□□□□□ -0.04
RFC4-214ENST00000494047 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
RFC4-214ENST00000494047 APAF1O14727 1248 aa14.78□□□□□ -0.04
RFC4-214ENST00000494047 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
RFC4-214ENST00000494047 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
RFC4-214ENST00000494047 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.04
RFC4-214ENST00000494047 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.04
RFC4-214ENST00000494047 C19orf44Q9H6X5 657 aa14.77□□□□□ -0.04
RFC4-214ENST00000494047 METP08581 1390 aa14.76□□□□□ -0.05
RFC4-214ENST00000494047 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
RFC4-214ENST00000494047 PLIN1O60240 522 aa14.76□□□□□ -0.05
RFC4-214ENST00000494047 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
RFC4-214ENST00000494047 PTPRUQ92729 1446 aa14.76□□□□□ -0.05
RFC4-214ENST00000494047 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
RFC4-214ENST00000494047 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
RFC4-214ENST00000494047 WWC1Q8IX03 1113 aa14.75□□□□□ -0.05
RFC4-214ENST00000494047 HSPA1LP34931 641 aa14.74□□□□□ -0.05
RFC4-214ENST00000494047 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
RFC4-214ENST00000494047 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
RFC4-214ENST00000494047 TULP4Q9NRJ4 1543 aa14.74□□□□□ -0.05
RFC4-214ENST00000494047 DCCP43146 1447 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 NPM2Q86SE8 214 aaKnown RBP14.73□□□□□ -0.05
RFC4-214ENST00000494047 SLAIN2Q9P270 581 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 IL16Q14005 1332 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 SETD1AO15047 1707 aaKnown RBP14.73□□□□□ -0.05
RFC4-214ENST00000494047 ATF3P18847 181 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 BECN1Q14457 450 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 NBR1Q14596 966 aa14.73□□□□□ -0.05
RFC4-214ENST00000494047 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
RFC4-214ENST00000494047 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
RFC4-214ENST00000494047 DLC1Q96QB1 1528 aa14.72□□□□□ -0.05
RFC4-214ENST00000494047 PTCH1Q13635 1447 aa14.72□□□□□ -0.05
RFC4-214ENST00000494047 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
RFC4-214ENST00000494047 CDC42BPGQ6DT37 1551 aa14.71□□□□□ -0.05
RFC4-214ENST00000494047 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
RFC4-214ENST00000494047 EIF5BO60841 1220 aaKnown RBP14.71□□□□□ -0.06
RFC4-214ENST00000494047 ZNF428Q96B54 188 aa14.71□□□□□ -0.06
RFC4-214ENST00000494047 TERF2IPQ9NYB0 399 aa14.71□□□□□ -0.06
RFC4-214ENST00000494047 NEFMP07197 916 aa14.7□□□□□ -0.06
RFC4-214ENST00000494047 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
RFC4-214ENST00000494047 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
RFC4-214ENST00000494047 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
RFC4-214ENST00000494047 KIF20BQ96Q89 1820 aa14.69□□□□□ -0.06
RFC4-214ENST00000494047 ROBO1Q9Y6N7 1651 aa14.68□□□□□ -0.06
RFC4-214ENST00000494047 RWDD1Q9H446 243 aaPredicted RBP14.68□□□□□ -0.06
RFC4-214ENST00000494047 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
RFC4-214ENST00000494047 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
RFC4-214ENST00000494047 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
RFC4-214ENST00000494047 ATP7BP35670 1465 aa14.67□□□□□ -0.06
RFC4-214ENST00000494047 SENP3-EIF4A1A0A087X0R7 540 aa14.66□□□□□ -0.06
RFC4-214ENST00000494047 SOCS7O14512 581 aa14.66□□□□□ -0.06
RFC4-214ENST00000494047 TECPR2O15040 1411 aa14.66□□□□□ -0.06
RFC4-214ENST00000494047 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
RFC4-214ENST00000494047 CALD1Q05682 793 aaKnown RBP14.66□□□□□ -0.06
RFC4-214ENST00000494047 SIRT1Q96EB6 747 aa14.65□□□□□ -0.06
RFC4-214ENST00000494047 ROBO2Q9HCK4 1378 aa14.64□□□□□ -0.07
RFC4-214ENST00000494047 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
RFC4-214ENST00000494047 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
RFC4-214ENST00000494047 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
RFC4-214ENST00000494047 MTHFSP49914 203 aa14.63□□□□□ -0.07
RFC4-214ENST00000494047 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
RFC4-214ENST00000494047 YTHDC2Q9H6S0 1430 aaKnown RBP14.63□□□□□ -0.07
RFC4-214ENST00000494047 BCAR3O75815 825 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 SLC12A5Q9H2X9 1139 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 NALCNQ8IZF0 1738 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
RFC4-214ENST00000494047 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
RFC4-214ENST00000494047 MST1RQ04912 1400 aa14.61□□□□□ -0.07
RFC4-214ENST00000494047 PPIP5K1Q6PFW1 1433 aa14.61□□□□□ -0.07
RFC4-214ENST00000494047 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
RFC4-214ENST00000494047 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
RFC4-214ENST00000494047 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
RFC4-214ENST00000494047 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
RFC4-214ENST00000494047 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
RFC4-214ENST00000494047 U2AF1L5P0DN76 240 aaPredicted RBP14.6□□□□□ -0.07
RFC4-214ENST00000494047 U2AF1Q01081 240 aaKnown RBP eCLIP14.6□□□□□ -0.07
RFC4-214ENST00000494047 MVPQ14764 893 aaKnown RBP14.6□□□□□ -0.07
RFC4-214ENST00000494047 TMEM132EQ6IEE7 984 aa14.6□□□□□ -0.07
RFC4-214ENST00000494047 ILDR2Q71H61 639 aa14.6□□□□□ -0.07
RFC4-214ENST00000494047 STK26Q9P289 416 aa14.6□□□□□ -0.07
RFC4-214ENST00000494047 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
RFC4-214ENST00000494047 RGS3P49796 1198 aa14.59□□□□□ -0.07
RFC4-214ENST00000494047 HAP1P54257 671 aaPredicted RBP14.59□□□□□ -0.07
RFC4-214ENST00000494047 BRPF1P55201 1214 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms