RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 FHDC1Q9C0D6 1143 aaPredicted RBP14.89□□□□□ -0.03
NR1H3-225ENST00000494018 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
NR1H3-225ENST00000494018 ITGAEP38570 1179 aa14.88□□□□□ -0.03
NR1H3-225ENST00000494018 TMEM132EQ6IEE7 984 aa14.88□□□□□ -0.03
NR1H3-225ENST00000494018 PRAG1Q86YV5 1406 aa14.88□□□□□ -0.03
NR1H3-225ENST00000494018 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
NR1H3-225ENST00000494018 SYT17Q9BSW7 474 aa14.87□□□□□ -0.03
NR1H3-225ENST00000494018 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
NR1H3-225ENST00000494018 CHRNA2Q15822 529 aa14.86□□□□□ -0.03
NR1H3-225ENST00000494018 SPATA31A1Q5TZJ5 1347 aa14.86□□□□□ -0.03
NR1H3-225ENST00000494018 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
NR1H3-225ENST00000494018 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
NR1H3-225ENST00000494018 PTGER2P43116 358 aa14.85□□□□□ -0.03
NR1H3-225ENST00000494018 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
NR1H3-225ENST00000494018 PRDM11Q9NQV5 511 aa14.84□□□□□ -0.03
NR1H3-225ENST00000494018 TECPR2O15040 1411 aa14.83□□□□□ -0.03
NR1H3-225ENST00000494018 PPLO60437 1756 aa14.83□□□□□ -0.03
NR1H3-225ENST00000494018 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
NR1H3-225ENST00000494018 PTF1AQ7RTS3 328 aa14.81□□□□□ -0.04
NR1H3-225ENST00000494018 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
NR1H3-225ENST00000494018 ADGRF5Q8IZF2 1346 aa14.81□□□□□ -0.04
NR1H3-225ENST00000494018 NRXN1Q9ULB1 1477 aa14.81□□□□□ -0.04
NR1H3-225ENST00000494018 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
NR1H3-225ENST00000494018 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
NR1H3-225ENST00000494018 GPR162Q16538 588 aa14.79□□□□□ -0.04
NR1H3-225ENST00000494018 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
NR1H3-225ENST00000494018 RRBP1Q9P2E9 1410 aaKnown RBP14.79□□□□□ -0.04
NR1H3-225ENST00000494018 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
NR1H3-225ENST00000494018 ZC3H6P61129 1189 aaKnown RBP14.78□□□□□ -0.04
NR1H3-225ENST00000494018 KIAA0232Q92628 1395 aa14.77□□□□□ -0.04
NR1H3-225ENST00000494018 CAPN15O75808 1086 aa14.77□□□□□ -0.05
NR1H3-225ENST00000494018 EVA1CP58658 441 aa14.77□□□□□ -0.05
NR1H3-225ENST00000494018 ALS2Q96Q42 1657 aa14.77□□□□□ -0.05
NR1H3-225ENST00000494018 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
NR1H3-225ENST00000494018 CRYBG1Q9Y4K1 1723 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
NR1H3-225ENST00000494018 DLC1Q96QB1 1528 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 SHANK3Q9BYB0 1731 aa14.75□□□□□ -0.05
NR1H3-225ENST00000494018 ABCC11Q96J66 1382 aa14.74□□□□□ -0.05
NR1H3-225ENST00000494018 PROM2Q8N271 834 aa14.74□□□□□ -0.05
NR1H3-225ENST00000494018 SBF2Q86WG5 1849 aa14.73□□□□□ -0.05
NR1H3-225ENST00000494018 BARGINQ6ZT62 677 aa14.72□□□□□ -0.05
NR1H3-225ENST00000494018 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
NR1H3-225ENST00000494018 ARXQ96QS3 562 aa14.71□□□□□ -0.05
NR1H3-225ENST00000494018 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
NR1H3-225ENST00000494018 GPRASP1Q5JY77 1395 aa14.71□□□□□ -0.06
NR1H3-225ENST00000494018 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
NR1H3-225ENST00000494018 SSH2Q76I76 1423 aa14.7□□□□□ -0.06
NR1H3-225ENST00000494018 TCP11L2Q8N4U5 519 aa14.7□□□□□ -0.06
NR1H3-225ENST00000494018 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
NR1H3-225ENST00000494018 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
NR1H3-225ENST00000494018 PLSCR1O15162 318 aa14.69□□□□□ -0.06
NR1H3-225ENST00000494018 PRAM1Q96QH2 718 aa14.69□□□□□ -0.06
NR1H3-225ENST00000494018 MTFR1LQ9H019 292 aa14.69□□□□□ -0.06
NR1H3-225ENST00000494018 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
NR1H3-225ENST00000494018 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
NR1H3-225ENST00000494018 HSPA6P17066 643 aa14.67□□□□□ -0.06
NR1H3-225ENST00000494018 NGDNQ8NEJ9 315 aaKnown RBP14.67□□□□□ -0.06
NR1H3-225ENST00000494018 ZNF526Q8TF50 670 aaPredicted RBP14.67□□□□□ -0.06
NR1H3-225ENST00000494018 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
NR1H3-225ENST00000494018 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
NR1H3-225ENST00000494018 PRR36Q9H6K5 1346 aa14.66□□□□□ -0.06
NR1H3-225ENST00000494018 PEAK1Q9H792 1746 aa14.66□□□□□ -0.06
NR1H3-225ENST00000494018 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 POGKQ9P215 609 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 PARP4Q9UKK3 1724 aaKnown RBP14.65□□□□□ -0.06
NR1H3-225ENST00000494018 OVOS2A0A0G2JMS6 1433 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 OVOS2A0A0J9YW53 1432 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 OVOS2Q6IE36 1432 aa14.65□□□□□ -0.06
NR1H3-225ENST00000494018 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
NR1H3-225ENST00000494018 ATP10DQ9P241 1426 aa14.63□□□□□ -0.07
NR1H3-225ENST00000494018 MINK1Q8N4C8 1332 aaPredicted RBP14.63□□□□□ -0.07
NR1H3-225ENST00000494018 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
NR1H3-225ENST00000494018 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
NR1H3-225ENST00000494018 SIRT1Q96EB6 747 aa14.61□□□□□ -0.07
NR1H3-225ENST00000494018 YBX3P16989 372 aaKnown RBP eCLIP14.6□□□□□ -0.07
NR1H3-225ENST00000494018 DDB1Q16531 1140 aa14.6□□□□□ -0.07
NR1H3-225ENST00000494018 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
NR1H3-225ENST00000494018 MARCH10Q8NA82 808 aaPredicted RBP14.6□□□□□ -0.07
NR1H3-225ENST00000494018 GPBP1L1Q9HC44 474 aaPredicted RBP14.6□□□□□ -0.07
NR1H3-225ENST00000494018 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
NR1H3-225ENST00000494018 PIK3C2GO75747 1445 aa14.59□□□□□ -0.07
NR1H3-225ENST00000494018 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
NR1H3-225ENST00000494018 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
NR1H3-225ENST00000494018 THRAP3Q9Y2W1 955 aaKnown RBP14.59□□□□□ -0.07
NR1H3-225ENST00000494018 ATP7BP35670 1465 aa14.58□□□□□ -0.08
NR1H3-225ENST00000494018 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
NR1H3-225ENST00000494018 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
NR1H3-225ENST00000494018 LMO7Q8WWI1 1683 aa14.57□□□□□ -0.08
NR1H3-225ENST00000494018 AKAP12Q02952 1782 aa14.56□□□□□ -0.08
NR1H3-225ENST00000494018 C11orf95C9JLR9 678 aaPredicted RBP14.56□□□□□ -0.08
NR1H3-225ENST00000494018 C14orf93Q9H972 538 aaKnown RBP14.56□□□□□ -0.08
NR1H3-225ENST00000494018 TRAK1Q9UPV9 953 aa14.56□□□□□ -0.08
NR1H3-225ENST00000494018 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms