RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
SPTA1-208ENST00000492934 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTA1-208ENST00000492934 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
SPTA1-208ENST00000492934 NUP155O75694 1391 aa11.04□□□□□ -0.64
SPTA1-208ENST00000492934 SPHKAPQ2M3C7 1700 aa11.04□□□□□ -0.64
SPTA1-208ENST00000492934 ITGAEP38570 1179 aa11.04□□□□□ -0.64
SPTA1-208ENST00000492934 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
SPTA1-208ENST00000492934 JCADQ9P266 1359 aa11.03□□□□□ -0.64
SPTA1-208ENST00000492934 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
SPTA1-208ENST00000492934 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
SPTA1-208ENST00000492934 SLAIN2Q9P270 581 aa11.03□□□□□ -0.64
SPTA1-208ENST00000492934 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.03□□□□□ -0.64
SPTA1-208ENST00000492934 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.64
SPTA1-208ENST00000492934 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.64
SPTA1-208ENST00000492934 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
SPTA1-208ENST00000492934 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.65
SPTA1-208ENST00000492934 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
SPTA1-208ENST00000492934 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
SPTA1-208ENST00000492934 SETBP1Q9Y6X0 1596 aa11.02□□□□□ -0.65
SPTA1-208ENST00000492934 LRP6O75581 1613 aa11.01□□□□□ -0.65
SPTA1-208ENST00000492934 PTPRUQ92729 1446 aa11.01□□□□□ -0.65
SPTA1-208ENST00000492934 CLTCL1P53675 1640 aa11□□□□□ -0.65
SPTA1-208ENST00000492934 POTEAQ6S8J7 498 aa11□□□□□ -0.65
SPTA1-208ENST00000492934 SHPRHQ149N8 1683 aa11□□□□□ -0.65
SPTA1-208ENST00000492934 ATF3P18847 181 aa10.99□□□□□ -0.65
SPTA1-208ENST00000492934 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
SPTA1-208ENST00000492934 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
SPTA1-208ENST00000492934 RNF25Q96BH1 459 aaPredicted RBP10.99□□□□□ -0.65
SPTA1-208ENST00000492934 DCCP43146 1447 aa10.99□□□□□ -0.65
SPTA1-208ENST00000492934 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
SPTA1-208ENST00000492934 SOX12O15370 315 aa10.98□□□□□ -0.65
SPTA1-208ENST00000492934 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
SPTA1-208ENST00000492934 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
SPTA1-208ENST00000492934 ZNF326Q5BKZ1 582 aaKnown RBP10.97□□□□□ -0.65
SPTA1-208ENST00000492934 MEX3CQ5U5Q3 659 aaKnown RBP10.97□□□□□ -0.65
SPTA1-208ENST00000492934 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
SPTA1-208ENST00000492934 NALCNQ8IZF0 1738 aa10.96□□□□□ -0.65
SPTA1-208ENST00000492934 SPATA31A6Q5VVP1 1343 aa10.96□□□□□ -0.65
SPTA1-208ENST00000492934 AMOTL2Q9Y2J4 779 aa10.96□□□□□ -0.65
SPTA1-208ENST00000492934 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
SPTA1-208ENST00000492934 MST1RQ04912 1400 aa10.95□□□□□ -0.66
SPTA1-208ENST00000492934 ADGRL3Q9HAR2 1447 aa10.95□□□□□ -0.66
SPTA1-208ENST00000492934 RRBP1Q9P2E9 1410 aaKnown RBP10.95□□□□□ -0.66
SPTA1-208ENST00000492934 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
SPTA1-208ENST00000492934 BRINP3Q76B58 766 aa10.95□□□□□ -0.66
SPTA1-208ENST00000492934 NAIPQ13075 1403 aa10.94□□□□□ -0.66
SPTA1-208ENST00000492934 METP08581 1390 aa10.94□□□□□ -0.66
SPTA1-208ENST00000492934 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
SPTA1-208ENST00000492934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
SPTA1-208ENST00000492934 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
SPTA1-208ENST00000492934 KIF1BO60333 1816 aa10.93□□□□□ -0.66
SPTA1-208ENST00000492934 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPTA1-208ENST00000492934 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
SPTA1-208ENST00000492934 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
SPTA1-208ENST00000492934 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
SPTA1-208ENST00000492934 NUTM2BA6NNL0 878 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-208ENST00000492934 NUTM2EB1AL46 878 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-208ENST00000492934 ZNF772Q68DY9 489 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-208ENST00000492934 NUTM2AQ8IVF1 878 aaPredicted RBP10.9□□□□□ -0.66
SPTA1-208ENST00000492934 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
SPTA1-208ENST00000492934 RGL2O15211 777 aa10.89□□□□□ -0.67
SPTA1-208ENST00000492934 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
SPTA1-208ENST00000492934 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
SPTA1-208ENST00000492934 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
SPTA1-208ENST00000492934 PRAG1Q86YV5 1406 aa10.87□□□□□ -0.67
SPTA1-208ENST00000492934 KHSRPQ92945 711 aaKnown RBP eCLIP10.87□□□□□ -0.675e-8■■■■□ 21.8
SPTA1-208ENST00000492934 PNPLA6Q8IY17 1366 aa10.87□□□□□ -0.67
SPTA1-208ENST00000492934 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
SPTA1-208ENST00000492934 AFF2P51816 1311 aa10.86□□□□□ -0.67
SPTA1-208ENST00000492934 PPLO60437 1756 aa10.86□□□□□ -0.67
SPTA1-208ENST00000492934 DDX17Q92841 729 aaKnown RBP10.86□□□□□ -0.67
SPTA1-208ENST00000492934 LAMC1P11047 1609 aa10.86□□□□□ -0.67
SPTA1-208ENST00000492934 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
SPTA1-208ENST00000492934 CDC42BPGQ6DT37 1551 aa10.86□□□□□ -0.67
SPTA1-208ENST00000492934 RGS12O14924 1447 aa10.84□□□□□ -0.67
SPTA1-208ENST00000492934 RXRBP28702 533 aa10.84□□□□□ -0.67
SPTA1-208ENST00000492934 PBX2P40425 430 aa10.84□□□□□ -0.67
SPTA1-208ENST00000492934 LRRC59Q96AG4 307 aaKnown RBP10.84□□□□□ -0.67
SPTA1-208ENST00000492934 C8orf37Q96NL8 207 aa10.84□□□□□ -0.67
SPTA1-208ENST00000492934 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
SPTA1-208ENST00000492934 STK25O00506 426 aa10.83□□□□□ -0.68
SPTA1-208ENST00000492934 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
SPTA1-208ENST00000492934 CCDC144AA2RUR9 1427 aa10.83□□□□□ -0.68
SPTA1-208ENST00000492934 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPTA1-208ENST00000492934 PLA2G2EQ9NZK7 142 aa10.82□□□□□ -0.68
SPTA1-208ENST00000492934 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
SPTA1-208ENST00000492934 IFT172Q9UG01 1749 aa10.81□□□□□ -0.68
SPTA1-208ENST00000492934 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
SPTA1-208ENST00000492934 ADAMTS2O95450 1211 aa10.8□□□□□ -0.68
SPTA1-208ENST00000492934 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
SPTA1-208ENST00000492934 KNDC1Q76NI1 1749 aa10.79□□□□□ -0.68
SPTA1-208ENST00000492934 HCSTQ9UBK5 93 aa10.79□□□□□ -0.68
SPTA1-208ENST00000492934 SOS2Q07890 1332 aaPredicted RBP10.79□□□□□ -0.68
SPTA1-208ENST00000492934 TECPR2O15040 1411 aa10.78□□□□□ -0.68
SPTA1-208ENST00000492934 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
SPTA1-208ENST00000492934 NLRP6P59044 892 aa10.78□□□□□ -0.68
SPTA1-208ENST00000492934 RBM6P78332 1123 aaKnown RBP10.78□□□□□ -0.68
SPTA1-208ENST00000492934 MYOM2P54296 1465 aa10.78□□□□□ -0.68
SPTA1-208ENST00000492934 PXDNQ92626 1479 aa10.78□□□□□ -0.68
SPTA1-208ENST00000492934 PIK3C2GO75747 1445 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms