RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
GPNMB-214ENST00000492858 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
GPNMB-214ENST00000492858 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
GPNMB-214ENST00000492858 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
GPNMB-214ENST00000492858 PRDM11Q9NQV5 511 aa18.07■□□□□ 0.48
GPNMB-214ENST00000492858 CFAP70Q5T0N1 1121 aa18.06■□□□□ 0.48
GPNMB-214ENST00000492858 POGKQ9P215 609 aa18.06■□□□□ 0.48
GPNMB-214ENST00000492858 TRPM3Q9HCF6 1732 aaPredicted RBP18.06■□□□□ 0.48
GPNMB-214ENST00000492858 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
GPNMB-214ENST00000492858 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
GPNMB-214ENST00000492858 PPP1R1BQ9UD71 204 aaPredicted RBP18.05■□□□□ 0.48
GPNMB-214ENST00000492858 ALS2Q96Q42 1657 aa18.04■□□□□ 0.48
GPNMB-214ENST00000492858 NBPF8Q3BBV2 869 aa18.03■□□□□ 0.48
GPNMB-214ENST00000492858 NBPF14Q5TI25 921 aa18.03■□□□□ 0.48
GPNMB-214ENST00000492858 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
GPNMB-214ENST00000492858 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
GPNMB-214ENST00000492858 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
GPNMB-214ENST00000492858 CHRNA2Q15822 529 aa18.02■□□□□ 0.48
GPNMB-214ENST00000492858 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
GPNMB-214ENST00000492858 SPON1Q9HCB6 807 aa18.01■□□□□ 0.47
GPNMB-214ENST00000492858 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
GPNMB-214ENST00000492858 PRR36Q9H6K5 1346 aa18■□□□□ 0.47
GPNMB-214ENST00000492858 UTRNP46939 3433 aa18■□□□□ 0.47
GPNMB-214ENST00000492858 PDE3BQ13370 1112 aa18■□□□□ 0.47
GPNMB-214ENST00000492858 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
GPNMB-214ENST00000492858 USP35Q9P2H5 1018 aa18■□□□□ 0.47
GPNMB-214ENST00000492858 RREB1Q92766 1687 aa17.99■□□□□ 0.47
GPNMB-214ENST00000492858 KCNQ2O43526 872 aa17.99■□□□□ 0.47
GPNMB-214ENST00000492858 NINLQ9Y2I6 1382 aa17.99■□□□□ 0.47
GPNMB-214ENST00000492858 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
GPNMB-214ENST00000492858 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
GPNMB-214ENST00000492858 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
GPNMB-214ENST00000492858 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
GPNMB-214ENST00000492858 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
GPNMB-214ENST00000492858 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
GPNMB-214ENST00000492858 ZC3H6P61129 1189 aaKnown RBP17.96■□□□□ 0.47
GPNMB-214ENST00000492858 TULP4Q9NRJ4 1543 aa17.96■□□□□ 0.47
GPNMB-214ENST00000492858 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
GPNMB-214ENST00000492858 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
GPNMB-214ENST00000492858 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
GPNMB-214ENST00000492858 EVA1CP58658 441 aa17.94■□□□□ 0.46
GPNMB-214ENST00000492858 SSH2Q76I76 1423 aa17.93■□□□□ 0.46
GPNMB-214ENST00000492858 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
GPNMB-214ENST00000492858 LARP1Q6PKG0 1096 aaKnown RBP17.91■□□□□ 0.46
GPNMB-214ENST00000492858 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
GPNMB-214ENST00000492858 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
GPNMB-214ENST00000492858 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
GPNMB-214ENST00000492858 CAMTA1Q9Y6Y1 1673 aa17.9■□□□□ 0.46
GPNMB-214ENST00000492858 ZNF784Q8NCA9 323 aaPredicted RBP17.88■□□□□ 0.45
GPNMB-214ENST00000492858 ATP7BP35670 1465 aa17.88■□□□□ 0.45
GPNMB-214ENST00000492858 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
GPNMB-214ENST00000492858 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
GPNMB-214ENST00000492858 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
GPNMB-214ENST00000492858 NRKQ7Z2Y5 1582 aa17.84■□□□□ 0.45
GPNMB-214ENST00000492858 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
GPNMB-214ENST00000492858 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
GPNMB-214ENST00000492858 PDGFDQ9GZP0 370 aaPredicted RBP17.84■□□□□ 0.45
GPNMB-214ENST00000492858 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.45
GPNMB-214ENST00000492858 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.45
GPNMB-214ENST00000492858 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.45
GPNMB-214ENST00000492858 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
GPNMB-214ENST00000492858 CPDO75976 1380 aa17.82■□□□□ 0.44
GPNMB-214ENST00000492858 PLSCR1O15162 318 aa17.82■□□□□ 0.44
GPNMB-214ENST00000492858 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
GPNMB-214ENST00000492858 ACEP12821 1306 aa17.81■□□□□ 0.44
GPNMB-214ENST00000492858 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
GPNMB-214ENST00000492858 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
GPNMB-214ENST00000492858 CASZ1Q86V15 1759 aa17.81■□□□□ 0.44
GPNMB-214ENST00000492858 LMO7Q8WWI1 1683 aa17.8■□□□□ 0.44
GPNMB-214ENST00000492858 POLR3AO14802 1390 aaPredicted RBP17.8■□□□□ 0.44
GPNMB-214ENST00000492858 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
GPNMB-214ENST00000492858 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
GPNMB-214ENST00000492858 USP19O94966 1318 aa17.79■□□□□ 0.44
GPNMB-214ENST00000492858 PTGER2P43116 358 aa17.79■□□□□ 0.44
GPNMB-214ENST00000492858 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
GPNMB-214ENST00000492858 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
GPNMB-214ENST00000492858 MYOM1P52179 1685 aa17.78■□□□□ 0.44
GPNMB-214ENST00000492858 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
GPNMB-214ENST00000492858 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
GPNMB-214ENST00000492858 RGPD3A6NKT7 1758 aaPredicted RBP17.78■□□□□ 0.44
GPNMB-214ENST00000492858 RGPD4Q7Z3J3 1758 aa17.78■□□□□ 0.44
GPNMB-214ENST00000492858 GCP02774 474 aa17.77■□□□□ 0.44
GPNMB-214ENST00000492858 C1QTNF8P60827 252 aa17.77■□□□□ 0.44
GPNMB-214ENST00000492858 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
GPNMB-214ENST00000492858 CRB1P82279 1406 aa17.77■□□□□ 0.44
GPNMB-214ENST00000492858 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
GPNMB-214ENST00000492858 CEP350Q5VT06 3117 aa17.77■□□□□ 0.43
GPNMB-214ENST00000492858 DDB1Q16531 1140 aa17.76■□□□□ 0.43
GPNMB-214ENST00000492858 PROM2Q8N271 834 aa17.76■□□□□ 0.43
GPNMB-214ENST00000492858 SYT17Q9BSW7 474 aa17.76■□□□□ 0.43
GPNMB-214ENST00000492858 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
GPNMB-214ENST00000492858 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
GPNMB-214ENST00000492858 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
GPNMB-214ENST00000492858 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
GPNMB-214ENST00000492858 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
GPNMB-214ENST00000492858 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
GPNMB-214ENST00000492858 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
GPNMB-214ENST00000492858 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
GPNMB-214ENST00000492858 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
GPNMB-214ENST00000492858 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms