RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
CNOT4-210ENST00000491203 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
CNOT4-210ENST00000491203 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
CNOT4-210ENST00000491203 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
CNOT4-210ENST00000491203 PPLO60437 1756 aa12.16□□□□□ -0.46
CNOT4-210ENST00000491203 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
CNOT4-210ENST00000491203 BCANQ96GW7 911 aa12.16□□□□□ -0.46
CNOT4-210ENST00000491203 MYOM2P54296 1465 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 PLEKHG1Q9ULL1 1385 aa12.15□□□□□ -0.46
CNOT4-210ENST00000491203 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-210ENST00000491203 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
CNOT4-210ENST00000491203 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
CNOT4-210ENST00000491203 POLR1AO95602 1720 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-210ENST00000491203 MED14O60244 1454 aa12.13□□□□□ -0.47
CNOT4-210ENST00000491203 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
CNOT4-210ENST00000491203 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
CNOT4-210ENST00000491203 PRAG1Q86YV5 1406 aa12.11□□□□□ -0.47
CNOT4-210ENST00000491203 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
CNOT4-210ENST00000491203 SETBP1Q9Y6X0 1596 aa12.1□□□□□ -0.47
CNOT4-210ENST00000491203 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
CNOT4-210ENST00000491203 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
CNOT4-210ENST00000491203 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
CNOT4-210ENST00000491203 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
CNOT4-210ENST00000491203 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
CNOT4-210ENST00000491203 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
CNOT4-210ENST00000491203 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
CNOT4-210ENST00000491203 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
CNOT4-210ENST00000491203 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■■■□□ 18.9
CNOT4-210ENST00000491203 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
CNOT4-210ENST00000491203 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
CNOT4-210ENST00000491203 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
CNOT4-210ENST00000491203 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
CNOT4-210ENST00000491203 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
CNOT4-210ENST00000491203 NRXN3Q9Y4C0 1643 aa12.07□□□□□ -0.48
CNOT4-210ENST00000491203 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
CNOT4-210ENST00000491203 LAMC1P11047 1609 aa12.06□□□□□ -0.48
CNOT4-210ENST00000491203 METP08581 1390 aa12.05□□□□□ -0.48
CNOT4-210ENST00000491203 KIAA1210Q9ULL0 1709 aa12.04□□□□□ -0.48
CNOT4-210ENST00000491203 TMEM132EQ6IEE7 984 aa12.04□□□□□ -0.48
CNOT4-210ENST00000491203 ERBB3P21860 1342 aa12.04□□□□□ -0.48
CNOT4-210ENST00000491203 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
CNOT4-210ENST00000491203 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
CNOT4-210ENST00000491203 RALGAPBQ86X10 1494 aa12.03□□□□□ -0.48
CNOT4-210ENST00000491203 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
CNOT4-210ENST00000491203 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
CNOT4-210ENST00000491203 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
CNOT4-210ENST00000491203 STK26Q9P289 416 aa12.02□□□□□ -0.49
CNOT4-210ENST00000491203 SETD1AO15047 1707 aaKnown RBP12.02□□□□□ -0.49
CNOT4-210ENST00000491203 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
CNOT4-210ENST00000491203 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
CNOT4-210ENST00000491203 KCNA6P17658 529 aa12.01□□□□□ -0.49
CNOT4-210ENST00000491203 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CNOT4-210ENST00000491203 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
CNOT4-210ENST00000491203 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
CNOT4-210ENST00000491203 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
CNOT4-210ENST00000491203 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
CNOT4-210ENST00000491203 PTPRUQ92729 1446 aa12□□□□□ -0.49
CNOT4-210ENST00000491203 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
CNOT4-210ENST00000491203 SLC34A2O95436 690 aa11.99□□□□□ -0.49
CNOT4-210ENST00000491203 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
CNOT4-210ENST00000491203 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
CNOT4-210ENST00000491203 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
CNOT4-210ENST00000491203 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
CNOT4-210ENST00000491203 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
CNOT4-210ENST00000491203 NWD1Q149M9 1564 aa11.97□□□□□ -0.49
CNOT4-210ENST00000491203 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
CNOT4-210ENST00000491203 TECPR2O15040 1411 aa11.96□□□□□ -0.49
CNOT4-210ENST00000491203 SIRT1Q96EB6 747 aa11.96□□□□□ -0.49
CNOT4-210ENST00000491203 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
CNOT4-210ENST00000491203 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
CNOT4-210ENST00000491203 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
CNOT4-210ENST00000491203 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
CNOT4-210ENST00000491203 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
CNOT4-210ENST00000491203 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
CNOT4-210ENST00000491203 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
CNOT4-210ENST00000491203 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
CNOT4-210ENST00000491203 POGKQ9P215 609 aa11.95□□□□□ -0.5
CNOT4-210ENST00000491203 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
CNOT4-210ENST00000491203 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
CNOT4-210ENST00000491203 NUDT7P0C024 238 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 FOXK1P85037 733 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 DSG2Q14126 1118 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 CPS1P31327 1500 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
CNOT4-210ENST00000491203 USP47Q96K76 1375 aa11.93□□□□□ -0.5
CNOT4-210ENST00000491203 STRCP1A6NGW2 1772 aa11.93□□□□□ -0.5
CNOT4-210ENST00000491203 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
CNOT4-210ENST00000491203 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
CNOT4-210ENST00000491203 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-210ENST00000491203 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
CNOT4-210ENST00000491203 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
CNOT4-210ENST00000491203 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
CNOT4-210ENST00000491203 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
CNOT4-210ENST00000491203 TMEM94Q12767 1356 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms