RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 PPIP5K1Q6PFW1 1433 aa19.43■□□□□ 0.7
TRAIP-211ENST00000491060 ZBTB7CA1YPR0 619 aa19.42■□□□□ 0.7
TRAIP-211ENST00000491060 UPF1Q92900 1129 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRAIP-211ENST00000491060 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
TRAIP-211ENST00000491060 UNC5CLQ8IV45 518 aa19.41■□□□□ 0.7
TRAIP-211ENST00000491060 CCDC61Q9Y6R9 512 aa19.41■□□□□ 0.7
TRAIP-211ENST00000491060 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.4■□□□□ 0.7
TRAIP-211ENST00000491060 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
TRAIP-211ENST00000491060 A0A0G2JS52 829 aa19.4■□□□□ 0.7
TRAIP-211ENST00000491060 MYT1Q01538 1121 aa19.4■□□□□ 0.7
TRAIP-211ENST00000491060 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
TRAIP-211ENST00000491060 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
TRAIP-211ENST00000491060 GLI3P10071 1580 aa19.4■□□□□ 0.7
TRAIP-211ENST00000491060 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
TRAIP-211ENST00000491060 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
TRAIP-211ENST00000491060 SLIT2O94813 1529 aa19.39■□□□□ 0.69
TRAIP-211ENST00000491060 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
TRAIP-211ENST00000491060 ZC3H6P61129 1189 aaKnown RBP19.38■□□□□ 0.69
TRAIP-211ENST00000491060 CHRNA2Q15822 529 aa19.38■□□□□ 0.69
TRAIP-211ENST00000491060 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
TRAIP-211ENST00000491060 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
TRAIP-211ENST00000491060 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
TRAIP-211ENST00000491060 ABTB2Q8N961 1025 aa19.37■□□□□ 0.69
TRAIP-211ENST00000491060 NWD2Q9ULI1 1742 aa19.37■□□□□ 0.69
TRAIP-211ENST00000491060 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
TRAIP-211ENST00000491060 COL14A1Q05707 1796 aaKnown RBP19.35■□□□□ 0.69
TRAIP-211ENST00000491060 NRAPQ86VF7 1730 aa19.35■□□□□ 0.69
TRAIP-211ENST00000491060 PRDM11Q9NQV5 511 aa19.35■□□□□ 0.69
TRAIP-211ENST00000491060 STRN4Q9NRL3 753 aa19.35■□□□□ 0.69
TRAIP-211ENST00000491060 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
TRAIP-211ENST00000491060 PLEKHG3A1L390 1219 aa19.34■□□□□ 0.69
TRAIP-211ENST00000491060 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
TRAIP-211ENST00000491060 SOX12O15370 315 aa19.32■□□□□ 0.68
TRAIP-211ENST00000491060 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
TRAIP-211ENST00000491060 VPS72Q15906 364 aa19.3■□□□□ 0.68
TRAIP-211ENST00000491060 FAM98CQ17RN3 349 aaKnown RBP19.3■□□□□ 0.68
TRAIP-211ENST00000491060 SEPT12Q8IYM1 358 aa19.3■□□□□ 0.68
TRAIP-211ENST00000491060 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
TRAIP-211ENST00000491060 AKAP12Q02952 1782 aa19.29■□□□□ 0.68
TRAIP-211ENST00000491060 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
TRAIP-211ENST00000491060 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
TRAIP-211ENST00000491060 NLRP6P59044 892 aa19.27■□□□□ 0.68
TRAIP-211ENST00000491060 USP6P35125 1406 aa19.26■□□□□ 0.67
TRAIP-211ENST00000491060 FAM182BQ5T319 152 aa19.26■□□□□ 0.67
TRAIP-211ENST00000491060 PIK3C2AO00443 1686 aa19.26■□□□□ 0.67
TRAIP-211ENST00000491060 EVA1CP58658 441 aa19.25■□□□□ 0.67
TRAIP-211ENST00000491060 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
TRAIP-211ENST00000491060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAIP-211ENST00000491060 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
TRAIP-211ENST00000491060 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
TRAIP-211ENST00000491060 ST20-MTHFSA0A0A6YYL1 179 aa19.22■□□□□ 0.67
TRAIP-211ENST00000491060 RGPD5Q99666 1765 aa19.21■□□□□ 0.67
TRAIP-211ENST00000491060 GCP02774 474 aa19.21■□□□□ 0.67
TRAIP-211ENST00000491060 KRT27Q7Z3Y8 459 aa19.21■□□□□ 0.67
TRAIP-211ENST00000491060 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
TRAIP-211ENST00000491060 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 SLC12A5Q9H2X9 1139 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 CAMTA1Q9Y6Y1 1673 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 USP19O94966 1318 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 SPATA31A5Q5VU36 1347 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 SPATA31A7Q8IWB4 1347 aa19.2■□□□□ 0.66
TRAIP-211ENST00000491060 LARP1Q6PKG0 1096 aaKnown RBP19.19■□□□□ 0.66
TRAIP-211ENST00000491060 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
TRAIP-211ENST00000491060 NME9Q86XW9 330 aa19.17■□□□□ 0.66
TRAIP-211ENST00000491060 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
TRAIP-211ENST00000491060 SSH2Q76I76 1423 aa19.17■□□□□ 0.66
TRAIP-211ENST00000491060 DEFB132Q7Z7B7 95 aa19.16■□□□□ 0.66
TRAIP-211ENST00000491060 SPATA31A1Q5TZJ5 1347 aa19.16■□□□□ 0.66
TRAIP-211ENST00000491060 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
TRAIP-211ENST00000491060 ZNF692Q9BU19 519 aaPredicted RBP19.15■□□□□ 0.66
TRAIP-211ENST00000491060 USP47Q96K76 1375 aa19.15■□□□□ 0.66
TRAIP-211ENST00000491060 SLIT3O75094 1523 aa19.15■□□□□ 0.66
TRAIP-211ENST00000491060 CPSF1Q10570 1443 aaKnown RBP19.14■□□□□ 0.65
TRAIP-211ENST00000491060 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
TRAIP-211ENST00000491060 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
TRAIP-211ENST00000491060 SBNO2Q9Y2G9 1366 aa19.13■□□□□ 0.65
TRAIP-211ENST00000491060 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
TRAIP-211ENST00000491060 THSD7AQ9UPZ6 1657 aa19.13■□□□□ 0.65
TRAIP-211ENST00000491060 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
TRAIP-211ENST00000491060 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
TRAIP-211ENST00000491060 TESK2Q96S53 571 aa19.12■□□□□ 0.65
TRAIP-211ENST00000491060 COL5A2P05997 1499 aaPredicted RBP19.11■□□□□ 0.65
TRAIP-211ENST00000491060 A0A1W2PP64 1363 aa19.11■□□□□ 0.65
TRAIP-211ENST00000491060 CPDO75976 1380 aa19.11■□□□□ 0.65
TRAIP-211ENST00000491060 CSB-PGBD3P0DP91 1061 aa19.11■□□□□ 0.65
TRAIP-211ENST00000491060 LTN1O94822 1766 aa19.11■□□□□ 0.65
TRAIP-211ENST00000491060 COL18A1P39060 1754 aa19.11■□□□□ 0.65
TRAIP-211ENST00000491060 TTC21AQ8NDW8 1320 aa19.1■□□□□ 0.65
TRAIP-211ENST00000491060 TOM1L2Q6ZVM7 507 aa19.1■□□□□ 0.65
TRAIP-211ENST00000491060 AXIN2Q9Y2T1 843 aa19.1■□□□□ 0.65
TRAIP-211ENST00000491060 BLMP54132 1417 aaPredicted RBP19.09■□□□□ 0.65
TRAIP-211ENST00000491060 TERF2IPQ9NYB0 399 aa19.09■□□□□ 0.65
TRAIP-211ENST00000491060 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
TRAIP-211ENST00000491060 EP400Q96L91 3159 aa19.07■□□□□ 0.64
TRAIP-211ENST00000491060 NFAT5O94916 1531 aa19.06■□□□□ 0.64
TRAIP-211ENST00000491060 TMF1P82094 1093 aa19.06■□□□□ 0.64
TRAIP-211ENST00000491060 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
TRAIP-211ENST00000491060 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
TRAIP-211ENST00000491060 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
TRAIP-211ENST00000491060 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms