RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 CYP4X1Q8N118 509 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 TOR4AQ9NXH8 423 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 CCDC88BA6NC98 1476 aa8.05□□□□□ -1.12
CSTF1-205ENST00000490539 WIPF1O43516 503 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 CD2BP2O95400 341 aaKnown RBP8.04□□□□□ -1.12
CSTF1-205ENST00000490539 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-205ENST00000490539 NDUFV2P19404 249 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 MSS51Q4VC12 460 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-205ENST00000490539 RNF19BQ6ZMZ0 732 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 RETREG3Q86VR2 466 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 HLA-CQ95604 372 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
CSTF1-205ENST00000490539 FANCD2Q9BXW9 1451 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 SPTLC1O15269 473 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 GUCA2AQ02747 115 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 NFX1Q12986 1120 aaKnown RBP8.03□□□□□ -1.12
CSTF1-205ENST00000490539 MTMR2Q13614 643 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
CSTF1-205ENST00000490539 NUTM2BA6NNL0 878 aaPredicted RBP8.02□□□□□ -1.13
CSTF1-205ENST00000490539 NUTM2EB1AL46 878 aaPredicted RBP8.02□□□□□ -1.13
CSTF1-205ENST00000490539 NUTM2DQ5VT03 806 aaPredicted RBP8.02□□□□□ -1.13
CSTF1-205ENST00000490539 NUTM2AQ8IVF1 878 aaPredicted RBP8.02□□□□□ -1.13
CSTF1-205ENST00000490539 ZBTB3Q9H5J0 574 aa8.02□□□□□ -1.13
CSTF1-205ENST00000490539 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
CSTF1-205ENST00000490539 CLK2P49760 499 aaKnown RBP8.01□□□□□ -1.13
CSTF1-205ENST00000490539 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
CSTF1-205ENST00000490539 BRPF1P55201 1214 aaPredicted RBP8.01□□□□□ -1.13
CSTF1-205ENST00000490539 PRPF38BQ5VTL8 546 aaKnown RBP8.01□□□□□ -1.13
CSTF1-205ENST00000490539 FAM160A2Q8N612 972 aaPredicted RBP8.01□□□□□ -1.13
CSTF1-205ENST00000490539 SKIV2LQ15477 1246 aaKnown RBP8□□□□□ -1.13
CSTF1-205ENST00000490539 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
CSTF1-205ENST00000490539 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
CSTF1-205ENST00000490539 POLR3EQ9NVU0 708 aa8□□□□□ -1.13
CSTF1-205ENST00000490539 PCDHGC3Q9UN70 934 aa8□□□□□ -1.13
CSTF1-205ENST00000490539 SYNJ2O15056 1496 aa8□□□□□ -1.13
CSTF1-205ENST00000490539 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
CSTF1-205ENST00000490539 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
CSTF1-205ENST00000490539 IL27Q8NEV9 243 aa7.99□□□□□ -1.13
CSTF1-205ENST00000490539 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
CSTF1-205ENST00000490539 FCF1Q9Y324 198 aaKnown RBP7.99□□□□□ -1.13
CSTF1-205ENST00000490539 TTC24A2A3L6 582 aaPredicted RBP7.98□□□□□ -1.13
CSTF1-205ENST00000490539 MMP16P51512 607 aa7.98□□□□□ -1.13
CSTF1-205ENST00000490539 SPATA31D1Q6ZQQ2 1576 aa7.97□□□□□ -1.13
CSTF1-205ENST00000490539 JUNDP17535 347 aa7.97□□□□□ -1.13
CSTF1-205ENST00000490539 PRR7Q8TB68 274 aa7.97□□□□□ -1.13
CSTF1-205ENST00000490539 PCMTD1Q96MG8 357 aaPredicted RBP7.97□□□□□ -1.13
CSTF1-205ENST00000490539 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
CSTF1-205ENST00000490539 PRDM2Q13029 1718 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 DXOO77932 396 aaKnown RBP7.96□□□□□ -1.14
CSTF1-205ENST00000490539 HRCP23327 699 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 DESI1Q6ICB0 168 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 PRDM9Q9NQV7 894 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
CSTF1-205ENST00000490539 PLEKHG3A1L390 1219 aa7.95□□□□□ -1.14
CSTF1-205ENST00000490539 TERTO14746 1132 aaKnown RBP7.95□□□□□ -1.14
CSTF1-205ENST00000490539 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
CSTF1-205ENST00000490539 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
CSTF1-205ENST00000490539 TSC1Q92574 1164 aa7.95□□□□□ -1.14
CSTF1-205ENST00000490539 LIMD1Q9UGP4 676 aa7.95□□□□□ -1.14
CSTF1-205ENST00000490539 SENP2Q9HC62 589 aa7.94□□□□□ -1.14
CSTF1-205ENST00000490539 ATP13A2Q9NQ11 1180 aa7.94□□□□□ -1.14
CSTF1-205ENST00000490539 LILRB3O75022 631 aa7.93□□□□□ -1.14
CSTF1-205ENST00000490539 CABLES1Q8TDN4 633 aa7.93□□□□□ -1.14
CSTF1-205ENST00000490539 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
CSTF1-205ENST00000490539 SNRPBP14678 240 aaKnown RBP7.92□□□□□ -1.14
CSTF1-205ENST00000490539 QPCTQ16769 361 aa7.92□□□□□ -1.14
CSTF1-205ENST00000490539 PTPRNQ16849 979 aa7.92□□□□□ -1.14
CSTF1-205ENST00000490539 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
CSTF1-205ENST00000490539 CCNYL3P0C7X3 344 aa7.91□□□□□ -1.14
CSTF1-205ENST00000490539 SMPD1P17405 629 aa7.91□□□□□ -1.14
CSTF1-205ENST00000490539 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
CSTF1-205ENST00000490539 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
CSTF1-205ENST00000490539 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
CSTF1-205ENST00000490539 WNT7AO00755 349 aa7.9□□□□□ -1.14
CSTF1-205ENST00000490539 URB2Q14146 1524 aaKnown RBP7.89□□□□□ -1.15
CSTF1-205ENST00000490539 CFAP99D6REC4 459 aa7.89□□□□□ -1.15
CSTF1-205ENST00000490539 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
CSTF1-205ENST00000490539 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
CSTF1-205ENST00000490539 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
CSTF1-205ENST00000490539 CTHP32929 405 aa7.88□□□□□ -1.15
CSTF1-205ENST00000490539 RTL5Q5HYW3 569 aaPredicted RBP7.88□□□□□ -1.15
CSTF1-205ENST00000490539 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
CSTF1-205ENST00000490539 EVA1BQ9NVM1 165 aa7.88□□□□□ -1.15
CSTF1-205ENST00000490539 DNMBPQ6XZF7 1577 aa7.88□□□□□ -1.15
CSTF1-205ENST00000490539 PPP2R2DQ66LE6 453 aa7.87□□□□□ -1.15
CSTF1-205ENST00000490539 TOPBP1Q92547 1522 aa7.87□□□□□ -1.15
CSTF1-205ENST00000490539 IFT140Q96RY7 1462 aa7.87□□□□□ -1.15
CSTF1-205ENST00000490539 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
CSTF1-205ENST00000490539 TRIM32Q13049 653 aa7.86□□□□□ -1.15
CSTF1-205ENST00000490539 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
CSTF1-205ENST00000490539 J3QL48 77 aa7.85□□□□□ -1.15
CSTF1-205ENST00000490539 TMEM259Q4ZIN3 620 aa7.85□□□□□ -1.15
CSTF1-205ENST00000490539 MRGPRX2Q96LB1 330 aa7.85□□□□□ -1.15
CSTF1-205ENST00000490539 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
CSTF1-205ENST00000490539 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
CSTF1-205ENST00000490539 AP1G2O75843 785 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms