RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IRF5Q13568 498 aa8.71□□□□□ -1.02
SSX2IP-208ENST00000490476 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
SSX2IP-208ENST00000490476 SLC27A5Q9Y2P5 690 aa8.71□□□□□ -1.02
SSX2IP-208ENST00000490476 MORN1Q5T089 497 aa8.7□□□□□ -1.02
SSX2IP-208ENST00000490476 NECTIN2Q92692 538 aa8.7□□□□□ -1.02
SSX2IP-208ENST00000490476 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
SSX2IP-208ENST00000490476 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 ACTN4O43707 911 aaKnown RBP8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 VAC14Q08AM6 782 aa8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 NR6A1Q15406 480 aa8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
SSX2IP-208ENST00000490476 PPP4CP60510 307 aa8.68□□□□□ -1.02
SSX2IP-208ENST00000490476 Q3C1V9 767 aa8.68□□□□□ -1.02
SSX2IP-208ENST00000490476 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
SSX2IP-208ENST00000490476 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
SSX2IP-208ENST00000490476 BCAMP50895 628 aa8.67□□□□□ -1.02
SSX2IP-208ENST00000490476 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
SSX2IP-208ENST00000490476 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
SSX2IP-208ENST00000490476 RNF19BQ6ZMZ0 732 aa8.67□□□□□ -1.02
SSX2IP-208ENST00000490476 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
SSX2IP-208ENST00000490476 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
SSX2IP-208ENST00000490476 GAPVD1Q14C86 1478 aa8.65□□□□□ -1.02
SSX2IP-208ENST00000490476 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SSX2IP-208ENST00000490476 GPR37L1O60883 481 aa8.65□□□□□ -1.02
SSX2IP-208ENST00000490476 ADAMTS19Q8TE59 1207 aa8.65□□□□□ -1.02
SSX2IP-208ENST00000490476 WNT2BQ93097 391 aa8.65□□□□□ -1.02
SSX2IP-208ENST00000490476 URB2Q14146 1524 aaKnown RBP8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 SOWAHBA6NEL2 793 aa8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 RFX1P22670 979 aa8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 APLP1P51693 650 aa8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 PTPN5P54829 565 aa8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 TSPOAP1O95153 1857 aa8.64□□□□□ -1.03
SSX2IP-208ENST00000490476 IFFO2Q5TF58 517 aa8.63□□□□□ -1.03
SSX2IP-208ENST00000490476 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
SSX2IP-208ENST00000490476 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
SSX2IP-208ENST00000490476 PCDHB3Q9Y5E6 796 aa8.63□□□□□ -1.03
SSX2IP-208ENST00000490476 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
SSX2IP-208ENST00000490476 FANCD2Q9BXW9 1451 aa8.62□□□□□ -1.03
SSX2IP-208ENST00000490476 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
SSX2IP-208ENST00000490476 LYPD8Q6UX82 237 aa8.61□□□□□ -1.03
SSX2IP-208ENST00000490476 RETREG2Q8NC44 543 aa8.61□□□□□ -1.03
SSX2IP-208ENST00000490476 IFT140Q96RY7 1462 aa8.61□□□□□ -1.03
SSX2IP-208ENST00000490476 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 NR1I2O75469 434 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 SYNJ1O43426 1573 aa8.6□□□□□ -1.03
SSX2IP-208ENST00000490476 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
SSX2IP-208ENST00000490476 COPS2P61201 443 aa8.58□□□□□ -1.04
SSX2IP-208ENST00000490476 ALG2Q9H553 416 aa8.58□□□□□ -1.04
SSX2IP-208ENST00000490476 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
SSX2IP-208ENST00000490476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
SSX2IP-208ENST00000490476 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
SSX2IP-208ENST00000490476 CTHP32929 405 aa8.57□□□□□ -1.04
SSX2IP-208ENST00000490476 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
SSX2IP-208ENST00000490476 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
SSX2IP-208ENST00000490476 JUNDP17535 347 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 THAP11Q96EK4 314 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 DIP2BQ9P265 1576 aa8.56□□□□□ -1.04
SSX2IP-208ENST00000490476 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 RGS20O76081 388 aa8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 TRAIPQ9BWF2 469 aa8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 TFIP11Q9UBB9 837 aaKnown RBP8.55□□□□□ -1.04
SSX2IP-208ENST00000490476 SOX11P35716 441 aa8.54□□□□□ -1.04
SSX2IP-208ENST00000490476 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
SSX2IP-208ENST00000490476 FKBPLQ9UIM3 349 aa8.54□□□□□ -1.04
SSX2IP-208ENST00000490476 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
SSX2IP-208ENST00000490476 NR1H3Q13133 447 aa8.53□□□□□ -1.04
SSX2IP-208ENST00000490476 PTPRNQ16849 979 aa8.53□□□□□ -1.04
SSX2IP-208ENST00000490476 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
SSX2IP-208ENST00000490476 SPSB2Q99619 263 aa8.53□□□□□ -1.04
SSX2IP-208ENST00000490476 PEG3Q9GZU2 1588 aa8.52□□□□□ -1.04
SSX2IP-208ENST00000490476 ABCC10Q5T3U5 1492 aa8.52□□□□□ -1.05
SSX2IP-208ENST00000490476 ZBBXA8MT70 800 aa8.52□□□□□ -1.05
SSX2IP-208ENST00000490476 F12P00748 615 aaPredicted RBP8.52□□□□□ -1.05
SSX2IP-208ENST00000490476 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
SSX2IP-208ENST00000490476 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
SSX2IP-208ENST00000490476 FAM160A2Q8N612 972 aaPredicted RBP8.51□□□□□ -1.05
SSX2IP-208ENST00000490476 TLL1O43897 1013 aa8.5□□□□□ -1.05
SSX2IP-208ENST00000490476 CCNYL3P0C7X3 344 aa8.5□□□□□ -1.05
SSX2IP-208ENST00000490476 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
SSX2IP-208ENST00000490476 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
SSX2IP-208ENST00000490476 A0A0G2JS52 829 aa8.49□□□□□ -1.05
SSX2IP-208ENST00000490476 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
SSX2IP-208ENST00000490476 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
SSX2IP-208ENST00000490476 MSS51Q4VC12 460 aa8.49□□□□□ -1.05
SSX2IP-208ENST00000490476 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
SSX2IP-208ENST00000490476 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms