RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TRIM6-TRIM34B2RNG4 842 aa4.69□□□□□ -1.66
UBXN4-208ENST00000490163 ICMTO60725 284 aa4.69□□□□□ -1.66
UBXN4-208ENST00000490163 STK32AQ8WU08 396 aa4.69□□□□□ -1.66
UBXN4-208ENST00000490163 RBCK1Q9BYM8 510 aa4.69□□□□□ -1.66
UBXN4-208ENST00000490163 NOVA2Q9UNW9 492 aaKnown RBP4.69□□□□□ -1.66
UBXN4-208ENST00000490163 EPS8L1Q8TE68 723 aa4.69□□□□□ -1.66
UBXN4-208ENST00000490163 WEE1P30291 646 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 MTMR2Q13614 643 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 PELP1Q8IZL8 1130 aaKnown RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 CDK11AQ9UQ88 783 aaPredicted RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 KDM4AO75164 1064 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 LMOD1P29536 600 aaPredicted RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 VAC14Q08AM6 782 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 STAG2Q8N3U4 1231 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 LARGE2Q8N3Y3 721 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 KHSRPQ92945 711 aaKnown RBP eCLIP4.68□□□□□ -1.662e-7■■■□□ 17
UBXN4-208ENST00000490163 WASLO00401 505 aaPredicted RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 SLC10A3P09131 477 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 SF3A1Q15459 793 aaKnown RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 MAP7D1Q3KQU3 841 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 EGFLAMQ63HQ2 1017 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 RGL4Q8IZJ4 473 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 CITED4Q96RK1 184 aa4.68□□□□□ -1.66
UBXN4-208ENST00000490163 CXXC1Q9P0U4 656 aaPredicted RBP4.68□□□□□ -1.66
UBXN4-208ENST00000490163 CARNS1A5YM72 827 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 FAM174AQ8TBP5 190 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 ANKRD24Q8TF21 1146 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 TATDN2Q93075 761 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 THAP11Q96EK4 314 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 TBX22Q9Y458 520 aa4.67□□□□□ -1.66
UBXN4-208ENST00000490163 BHMG1C9JSJ3 638 aaPredicted RBP4.66□□□□□ -1.66
UBXN4-208ENST00000490163 HDLBPQ00341 1268 aaKnown RBP4.66□□□□□ -1.66
UBXN4-208ENST00000490163 FAM161AQ3B820 660 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 OTUD5Q96G74 571 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 COLQQ9Y215 455 aaPredicted RBP4.66□□□□□ -1.66
UBXN4-208ENST00000490163 PSDA5PKW4 1024 aaPredicted RBP4.66□□□□□ -1.66
UBXN4-208ENST00000490163 ESPNB1AK53 854 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 ATP5J2-PTCD1G3V325 749 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 MKL1Q969V6 931 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 FAM129BQ96TA1 746 aa4.66□□□□□ -1.66
UBXN4-208ENST00000490163 USP17L3A6NCW0 530 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 USP17L4A6NCW7 530 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 CRTC2Q53ET0 693 aaPredicted RBP4.65□□□□□ -1.66
UBXN4-208ENST00000490163 USP17L2Q6R6M4 530 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 USP17L1Q7RTZ2 530 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 MAP3K7O43318 606 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 AP1G2O75843 785 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 TGIF2Q9GZN2 237 aa4.65□□□□□ -1.66
UBXN4-208ENST00000490163 TLDC2A0PJX2 215 aa4.65□□□□□ -1.67
UBXN4-208ENST00000490163 PIK3R5Q8WYR1 880 aa4.65□□□□□ -1.67
UBXN4-208ENST00000490163 CEP126Q9P2H0 1117 aa4.65□□□□□ -1.67
UBXN4-208ENST00000490163 ANKMY2Q8IV38 441 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 LRRN4Q8WUT4 740 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 MARSP56192 900 aaKnown RBP4.64□□□□□ -1.67
UBXN4-208ENST00000490163 TMX1Q9H3N1 280 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 ANKRD33BA6NCL7 494 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 ENPP3O14638 875 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 EIF4G2P78344 907 aaKnown RBP eCLIP4.64□□□□□ -1.67
UBXN4-208ENST00000490163 CLDN10P78369 228 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 DAB2P98082 770 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 ZNF592Q92610 1267 aa4.64□□□□□ -1.67
UBXN4-208ENST00000490163 TREHO43280 583 aa4.63□□□□□ -1.67
UBXN4-208ENST00000490163 MYT1Q01538 1121 aa4.63□□□□□ -1.67
UBXN4-208ENST00000490163 FAM163AQ96GL9 167 aaPredicted RBP4.63□□□□□ -1.67
UBXN4-208ENST00000490163 PDXDC2PQ6P474 469 aa4.63□□□□□ -1.67
UBXN4-208ENST00000490163 TMC4Q7Z404 712 aa4.63□□□□□ -1.67
UBXN4-208ENST00000490163 ZBBXA8MT70 800 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 SH3BP5LQ7L8J4 393 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 SH3RF1Q7Z6J0 888 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 LAPTM4BQ86VI4 370 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 SLC39A7Q92504 469 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 UPF1Q92900 1129 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBXN4-208ENST00000490163 PCDHGA11Q9Y5H2 935 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 PIK3CDO00329 1044 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 C21orf2O43822 256 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 SERINC3Q13530 473 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 ZNF746Q6NUN9 644 aaPredicted RBP4.62□□□□□ -1.67
UBXN4-208ENST00000490163 DCTN4Q9UJW0 460 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 NBPF26B4DH59 902 aa4.62□□□□□ -1.67
UBXN4-208ENST00000490163 SF3B2Q13435 895 aaKnown RBP4.62□□□□□ -1.67
UBXN4-208ENST00000490163 USP17L5A8MUK1 530 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 SCAMP3O14828 347 aaKnown RBP4.61□□□□□ -1.67
UBXN4-208ENST00000490163 FBXO45P0C2W1 286 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 FDX1P10109 184 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 MSS51Q4VC12 460 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 MORN1Q5T089 497 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 SEMA3FQ13275 785 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 RETREG3Q86VR2 466 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 NUTM1Q86Y26 1132 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 ZBED2Q9BTP6 218 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 BCL2L13Q9BXK5 485 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 MMP16P51512 607 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 EPHA4P54764 986 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 FGD1P98174 961 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 FANCCQ00597 558 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 NR6A1Q15406 480 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 SLC39A13Q96H72 371 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 FKBPLQ9UIM3 349 aa4.61□□□□□ -1.67
UBXN4-208ENST00000490163 CDK11BP21127 795 aaKnown RBP4.6□□□□□ -1.67
UBXN4-208ENST00000490163 FOXK2Q01167 660 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms