RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 WASLO00401 505 aaPredicted RBP25.45■■□□□ 1.66
SRM-206ENST00000490101 PLCH1Q4KWH8 1693 aa25.45■■□□□ 1.66
SRM-206ENST00000490101 ARHGEF28Q8N1W1 1705 aaKnown RBP25.43■■□□□ 1.66
SRM-206ENST00000490101 TRPM3Q9HCF6 1732 aaPredicted RBP25.43■■□□□ 1.66
SRM-206ENST00000490101 CCDC9Q9Y3X0 531 aaKnown RBP25.42■■□□□ 1.66
SRM-206ENST00000490101 NGDNQ8NEJ9 315 aaKnown RBP25.4■■□□□ 1.66
SRM-206ENST00000490101 NWD2Q9ULI1 1742 aa25.4■■□□□ 1.66
SRM-206ENST00000490101 PAK3O75914 559 aaPredicted RBP25.38■■□□□ 1.65
SRM-206ENST00000490101 VPS72Q15906 364 aa25.38■■□□□ 1.65
SRM-206ENST00000490101 ALS2Q96Q42 1657 aa25.38■■□□□ 1.65
SRM-206ENST00000490101 ST20-MTHFSA0A0A6YYL1 179 aa25.37■■□□□ 1.65
SRM-206ENST00000490101 FAM83GA6ND36 823 aa25.37■■□□□ 1.65
SRM-206ENST00000490101 BRWD3Q6RI45 1802 aa25.35■■□□□ 1.65
SRM-206ENST00000490101 ATP7BP35670 1465 aa25.35■■□□□ 1.65
SRM-206ENST00000490101 SEPT12Q8IYM1 358 aa25.35■■□□□ 1.65
SRM-206ENST00000490101 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
SRM-206ENST00000490101 SRCAPQ6ZRS2 3230 aa25.35■■□□□ 1.65
SRM-206ENST00000490101 ITSN1Q15811 1721 aa25.34■■□□□ 1.65
SRM-206ENST00000490101 A0A0G2JS52 829 aa25.32■■□□□ 1.64
SRM-206ENST00000490101 MYT1Q01538 1121 aa25.32■■□□□ 1.64
SRM-206ENST00000490101 CCDC125Q86Z20 511 aa25.32■■□□□ 1.64
SRM-206ENST00000490101 CDK19Q9BWU1 502 aa25.32■■□□□ 1.64
SRM-206ENST00000490101 BTG4Q9NY30 223 aa25.32■■□□□ 1.64
SRM-206ENST00000490101 NRAPQ86VF7 1730 aa25.3■■□□□ 1.64
SRM-206ENST00000490101 COL14A1Q05707 1796 aaKnown RBP25.3■■□□□ 1.64
SRM-206ENST00000490101 TESK2Q96S53 571 aa25.29■■□□□ 1.64
SRM-206ENST00000490101 CRYBG1Q9Y4K1 1723 aa25.28■■□□□ 1.64
SRM-206ENST00000490101 ZRANB1Q9UGI0 708 aa25.27■■□□□ 1.64
SRM-206ENST00000490101 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
SRM-206ENST00000490101 FAM98CQ17RN3 349 aaKnown RBP25.26■■□□□ 1.63
SRM-206ENST00000490101 C11orf95C9JLR9 678 aaPredicted RBP25.25■■□□□ 1.63
SRM-206ENST00000490101 ONECUT3O60422 494 aaPredicted RBP25.25■■□□□ 1.63
SRM-206ENST00000490101 SLC24A1O60721 1099 aa25.25■■□□□ 1.63
SRM-206ENST00000490101 NUTM2GQ5VZR2 741 aa25.25■■□□□ 1.63
SRM-206ENST00000490101 KRT27Q7Z3Y8 459 aa25.25■■□□□ 1.63
SRM-206ENST00000490101 PRDM11Q9NQV5 511 aa25.25■■□□□ 1.63
SRM-206ENST00000490101 TOPAZ1Q8N9V7 1692 aa25.25■■□□□ 1.63
SRM-206ENST00000490101 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
SRM-206ENST00000490101 WASHC2AQ641Q2 1341 aa25.24■■□□□ 1.63
SRM-206ENST00000490101 CENPJQ9HC77 1338 aaPredicted RBP25.24■■□□□ 1.63
SRM-206ENST00000490101 CCDC7Q96M83 1385 aa25.23■■□□□ 1.63
SRM-206ENST00000490101 ACEP12821 1306 aa25.23■■□□□ 1.63
SRM-206ENST00000490101 SF3B2Q13435 895 aaKnown RBP25.22■■□□□ 1.63
SRM-206ENST00000490101 DEFB132Q7Z7B7 95 aa25.22■■□□□ 1.63
SRM-206ENST00000490101 CCDC61Q9Y6R9 512 aa25.22■■□□□ 1.63
SRM-206ENST00000490101 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
SRM-206ENST00000490101 POLR3AO14802 1390 aaPredicted RBP25.2■■□□□ 1.63
SRM-206ENST00000490101 KIAA0232Q92628 1395 aa25.2■■□□□ 1.63
SRM-206ENST00000490101 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.62
SRM-206ENST00000490101 SRPK2P78362 688 aaKnown RBP25.2■■□□□ 1.62
SRM-206ENST00000490101 CHRNA2Q15822 529 aa25.2■■□□□ 1.62
SRM-206ENST00000490101 TMF1P82094 1093 aa25.19■■□□□ 1.62
SRM-206ENST00000490101 SPATA31A5Q5VU36 1347 aa25.18■■□□□ 1.62
SRM-206ENST00000490101 SPATA31A7Q8IWB4 1347 aa25.18■■□□□ 1.62
SRM-206ENST00000490101 ZC3H6P61129 1189 aaKnown RBP25.18■■□□□ 1.62
SRM-206ENST00000490101 PLEKHG3A1L390 1219 aa25.17■■□□□ 1.62
SRM-206ENST00000490101 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
SRM-206ENST00000490101 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
SRM-206ENST00000490101 STRN4Q9NRL3 753 aa25.16■■□□□ 1.62
SRM-206ENST00000490101 PPIP5K1Q6PFW1 1433 aa25.15■■□□□ 1.62
SRM-206ENST00000490101 FAM182BQ5T319 152 aa25.14■■□□□ 1.62
SRM-206ENST00000490101 ABTB2Q8N961 1025 aa25.14■■□□□ 1.62
SRM-206ENST00000490101 DIEXFQ68CQ4 756 aaKnown RBP25.13■■□□□ 1.61
SRM-206ENST00000490101 DDX10Q13206 875 aaKnown RBP25.12■■□□□ 1.61
SRM-206ENST00000490101 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
SRM-206ENST00000490101 NRKQ7Z2Y5 1582 aa25.11■■□□□ 1.61
SRM-206ENST00000490101 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
SRM-206ENST00000490101 SPATA31A1Q5TZJ5 1347 aa25.1■■□□□ 1.61
SRM-206ENST00000490101 USP35Q9P2H5 1018 aa25.09■■□□□ 1.61
SRM-206ENST00000490101 BAG6P46379 1132 aa25.07■■□□□ 1.6
SRM-206ENST00000490101 EVA1CP58658 441 aa25.07■■□□□ 1.6
SRM-206ENST00000490101 PUS7Q96PZ0 661 aaKnown RBP25.07■■□□□ 1.6
SRM-206ENST00000490101 CABP1Q9NZU7 370 aa25.07■■□□□ 1.6
SRM-206ENST00000490101 USP19O94966 1318 aa25.06■■□□□ 1.6
SRM-206ENST00000490101 EVC2Q86UK5 1308 aa25.06■■□□□ 1.6
SRM-206ENST00000490101 NLRP13Q86W25 1043 aa25.05■■□□□ 1.6
SRM-206ENST00000490101 SSH2Q76I76 1423 aa25.04■■□□□ 1.6
SRM-206ENST00000490101 RGPD1P0DJD0 1748 aa25.04■■□□□ 1.6
SRM-206ENST00000490101 POLR3GLQ9BT43 218 aa25.04■■□□□ 1.6
SRM-206ENST00000490101 CAMTA1Q9Y6Y1 1673 aa25.04■■□□□ 1.6
SRM-206ENST00000490101 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
SRM-206ENST00000490101 CPDO75976 1380 aa25.03■■□□□ 1.6
SRM-206ENST00000490101 GCP02774 474 aa25.02■■□□□ 1.6
SRM-206ENST00000490101 LARP1Q6PKG0 1096 aaKnown RBP25.02■■□□□ 1.6
SRM-206ENST00000490101 USP6P35125 1406 aa25.02■■□□□ 1.6
SRM-206ENST00000490101 EN1Q05925 392 aaPredicted RBP25.01■■□□□ 1.59
SRM-206ENST00000490101 LMO7Q8WWI1 1683 aa25.01■■□□□ 1.59
SRM-206ENST00000490101 PSDA5PKW4 1024 aaPredicted RBP24.99■■□□□ 1.59
SRM-206ENST00000490101 BRD4O60885 1362 aaPredicted RBP24.99■■□□□ 1.59
SRM-206ENST00000490101 NLRP6P59044 892 aa24.99■■□□□ 1.59
SRM-206ENST00000490101 TNS1Q9HBL0 1735 aaKnown RBP24.98■■□□□ 1.59
SRM-206ENST00000490101 BARGINQ6ZT62 677 aa24.96■■□□□ 1.59
SRM-206ENST00000490101 TCP11L2Q8N4U5 519 aa24.96■■□□□ 1.59
SRM-206ENST00000490101 TRIM37O94972 964 aa24.95■■□□□ 1.58
SRM-206ENST00000490101 PDE3BQ13370 1112 aa24.95■■□□□ 1.58
SRM-206ENST00000490101 FAM196AQ6ZSG2 479 aa24.95■■□□□ 1.58
SRM-206ENST00000490101 PIK3C2AO00443 1686 aa24.94■■□□□ 1.58
SRM-206ENST00000490101 COL5A2P05997 1499 aaPredicted RBP24.94■■□□□ 1.58
SRM-206ENST00000490101 SLIT3O75094 1523 aa24.93■■□□□ 1.58
SRM-206ENST00000490101 MYOM1P52179 1685 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms