RNA–Protein interactions for RNA: ENST00000488754.5

MPP1-215, Transcript of membrane palmitoylated protein 1, human

TSL 3

Gene MPP1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPP1-215	ENST00000488754	ARX	Q96QS3	562 aa		10.86	□□□□□ -0.67
MPP1-215	ENST00000488754	HCST	Q9UBK5	93 aa		10.86	□□□□□ -0.67
MPP1-215	ENST00000488754	TONSL	Q96HA7	1378 aa		10.86	□□□□□ -0.67
MPP1-215	ENST00000488754	BRPF1	P55201	1214 aa	Predicted RBP	10.85	□□□□□ -0.67
MPP1-215	ENST00000488754	KDM4C	Q9H3R0	1056 aa		10.85	□□□□□ -0.67
MPP1-215	ENST00000488754	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.85	□□□□□ -0.67
MPP1-215	ENST00000488754	SCAPER	Q9BY12	1400 aa		10.84	□□□□□ -0.67
MPP1-215	ENST00000488754	UACA	Q9BZF9	1416 aa		10.84	□□□□□ -0.67
MPP1-215	ENST00000488754	SMARCA4	P51532	1647 aa		10.84	□□□□□ -0.67
MPP1-215	ENST00000488754	PHLDB1	Q86UU1	1377 aa		10.83	□□□□□ -0.68
MPP1-215	ENST00000488754	CFH	P08603	1231 aa		10.83	□□□□□ -0.68
MPP1-215	ENST00000488754	NYAP1	Q6ZVC0	841 aa		10.83	□□□□□ -0.68
MPP1-215	ENST00000488754	IPO4	Q8TEX9	1081 aa	Known RBP	10.83	□□□□□ -0.68
MPP1-215	ENST00000488754	MYOM3	Q5VTT5	1437 aa		10.83	□□□□□ -0.68
MPP1-215	ENST00000488754	CCDC18	Q5T9S5	1454 aa		10.82	□□□□□ -0.68
MPP1-215	ENST00000488754	CCDC7	Q96M83	1385 aa		10.82	□□□□□ -0.68
MPP1-215	ENST00000488754	GCGR	P47871	477 aa		10.82	□□□□□ -0.68
MPP1-215	ENST00000488754	KMT5B	Q4FZB7	885 aa		10.82	□□□□□ -0.68
MPP1-215	ENST00000488754	PRR14	Q9BWN1	585 aa		10.82	□□□□□ -0.68
MPP1-215	ENST00000488754	BIVM-ERCC5	R4GMW8	1640 aa		10.81	□□□□□ -0.68
MPP1-215	ENST00000488754	KANK4	Q5T7N3	995 aa	Predicted RBP	10.81	□□□□□ -0.68
MPP1-215	ENST00000488754	NPM2	Q86SE8	214 aa	Known RBP	10.81	□□□□□ -0.68
MPP1-215	ENST00000488754	FRAT2	O75474	233 aa	Predicted RBP	10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	APLP1	P51693	650 aa		10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	RRP1	P56182	461 aa	Known RBP	10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	MRS2	Q9HD23	443 aa		10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	PLSCR2	Q9NRY7	297 aa		10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	TOP2B	Q02880	1626 aa		10.8	□□□□□ -0.68
MPP1-215	ENST00000488754	ZMYM3	Q14202	1370 aa		10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	KTN1	Q86UP2	1357 aa	Known RBP	10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	MRE11	P49959	708 aa		10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	SIN3A	Q96ST3	1273 aa		10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	BEGAIN	Q9BUH8	593 aa		10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	LRRC9	Q6ZRR7	1453 aa		10.79	□□□□□ -0.68
MPP1-215	ENST00000488754	LRPPRC	P42704	1394 aa	Known RBP	10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	HECW1	Q76N89	1606 aa		10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	ESPN	B1AK53	854 aa		10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	ACTN4	O43707	911 aa	Known RBP	10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	PDE3B	Q13370	1112 aa		10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	TAF3	Q5VWG9	929 aa		10.78	□□□□□ -0.68
MPP1-215	ENST00000488754	GOLGA6L3	A6NEY3	463 aa		10.77	□□□□□ -0.69
MPP1-215	ENST00000488754	KIF20A	O95235	890 aa		10.77	□□□□□ -0.69
MPP1-215	ENST00000488754	GTF2E1	P29083	439 aa	Predicted RBP	10.77	□□□□□ -0.69
MPP1-215	ENST00000488754	HFM1	A2PYH4	1435 aa		10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	XRCC6	P12956	609 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	CANX	P27824	592 aa	Known RBP	10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	DMTN	Q08495	405 aa		10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	FAM117A	Q9C073	453 aa		10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.76	□□□□□ -0.69
MPP1-215	ENST00000488754	ARHGAP35	Q9NRY4	1499 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	KDM4A	O75164	1064 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	RGS3	P49796	1198 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	CNGB1	Q14028	1251 aa	Predicted RBP	10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	NUTM1	Q86Y26	1132 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	PTPN23	Q9H3S7	1636 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	CTTNBP2	Q8WZ74	1663 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	ROCK2	O75116	1388 aa	Known RBP	10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	MIA2	Q96PC5	1412 aa		10.75	□□□□□ -0.69
MPP1-215	ENST00000488754	PLEKHH2	Q8IVE3	1493 aa		10.74	□□□□□ -0.69
MPP1-215	ENST00000488754	OFD1	O75665	1012 aa		10.74	□□□□□ -0.69
MPP1-215	ENST00000488754	FUT2	Q10981	343 aa		10.74	□□□□□ -0.69
MPP1-215	ENST00000488754	GTPBP4	Q9BZE4	634 aa	Known RBP	10.74	□□□□□ -0.69
MPP1-215	ENST00000488754	PCDHB3	Q9Y5E6	796 aa		10.74	□□□□□ -0.69
MPP1-215	ENST00000488754	USP46	P62068	366 aa		10.73	□□□□□ -0.69
MPP1-215	ENST00000488754	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.73	□□□□□ -0.69	1e-7	■■■■■ 33.8
MPP1-215	ENST00000488754	CCDC184	Q52MB2	194 aa		10.73	□□□□□ -0.69
MPP1-215	ENST00000488754	POGK	Q9P215	609 aa		10.73	□□□□□ -0.69
MPP1-215	ENST00000488754	KDM2B	Q8NHM5	1336 aa		10.73	□□□□□ -0.69
MPP1-215	ENST00000488754	SPATA31E1	Q6ZUB1	1445 aa		10.73	□□□□□ -0.69
MPP1-215	ENST00000488754	ATP6V1A	P38606	617 aa		10.72	□□□□□ -0.69
MPP1-215	ENST00000488754	DIXDC1	Q155Q3	683 aa		10.72	□□□□□ -0.69
MPP1-215	ENST00000488754	SPIRE2	Q8WWL2	714 aa		10.72	□□□□□ -0.69
MPP1-215	ENST00000488754	DHX29	Q7Z478	1369 aa	Known RBP	10.72	□□□□□ -0.69
MPP1-215	ENST00000488754	HSPA5	P11021	654 aa	Known RBP	10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	BECN1	Q14457	450 aa		10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	GRIPAP1	Q4V328	841 aa		10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	HS1BP3	Q53T59	392 aa		10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	TBC1D2	Q9BYX2	928 aa		10.71	□□□□□ -0.69
MPP1-215	ENST00000488754	LETM1	O95202	739 aa	Predicted RBP	10.7	□□□□□ -0.7
MPP1-215	ENST00000488754	FAM9B	Q8IZU0	186 aa		10.7	□□□□□ -0.7
MPP1-215	ENST00000488754	GCC2	Q8IWJ2	1684 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	PLEKHG3	A1L390	1219 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	PUS10	Q3MIT2	529 aa	Known RBP	10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	C8orf34	Q49A92	452 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	EXOC6	Q8TAG9	804 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	MYH16	Q9H6N6	1097 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	ANTXR1	Q9H6X2	564 aa		10.69	□□□□□ -0.7
MPP1-215	ENST00000488754	BRD4	O60885	1362 aa	Predicted RBP	10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	DYNC1I1	O14576	645 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	HOXA2	O43364	376 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	PTMS	P20962	102 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	TNNT2	P45379	298 aa	Predicted RBP	10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	RIPK4	P57078	832 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	TJAP1	Q5JTD0	557 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	MORN1	Q5T089	497 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	BLOC1S3	Q6QNY0	202 aa		10.68	□□□□□ -0.7
MPP1-215	ENST00000488754	MTR	Q99707	1265 aa		10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms