RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 MCM6Q14566 821 aa6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 CLUAP1Q96AJ1 413 aa6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 PKNOX2Q96KN3 472 aa6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 TOP2AP11388 1531 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 CECR2Q9BXF3 1484 aa6.5□□□□□ -1.37
CDC42BPA-213ENST00000488131 CTC1Q2NKJ3 1217 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 RTL5Q5HYW3 569 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 PPP4R2Q9NY27 417 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 MOXD2PA6NHM9 499 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 TERTO14746 1132 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 ADH1BP00325 375 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 AVPP01185 164 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 NDUFV2P19404 249 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 RIC3Q7Z5B4 369 aa6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 GMPR2Q9P2T1 348 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-213ENST00000488131 TNFRSF10AO00220 468 aa6.48□□□□□ -1.37
CDC42BPA-213ENST00000488131 NCAPD3P42695 1498 aa6.48□□□□□ -1.37
CDC42BPA-213ENST00000488131 WDR97A6NE52 1622 aa6.48□□□□□ -1.37
CDC42BPA-213ENST00000488131 RUSC2Q8N2Y8 1516 aa6.48□□□□□ -1.37
CDC42BPA-213ENST00000488131 SPTLC1O15269 473 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 SLC10A3P09131 477 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 SULF1Q8IWU6 871 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 ARXQ96QS3 562 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 SLC6A16Q9GZN6 736 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 PCDHB15Q9Y5E8 787 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 AXIN1O15169 862 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 S1PR4O95977 384 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 CFHP08603 1231 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 RFC5P40937 340 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 RSBN1LQ6PCB5 846 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 LIAT1Q6ZQX7 453 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 ATP1B4Q9UN42 357 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-213ENST00000488131 PEG3Q9GZU2 1588 aa6.46□□□□□ -1.37
CDC42BPA-213ENST00000488131 SMCPP49901 116 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 DIXDC1Q155Q3 683 aa6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 QPCTQ16769 361 aa6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 PPP2R2DQ66LE6 453 aa6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 IPO9Q96P70 1041 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 SNRKQ9NRH2 765 aa6.46□□□□□ -1.38
CDC42BPA-213ENST00000488131 ARID3CA6NKF2 412 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 NUTM1Q86Y26 1132 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 RDH13Q8NBN7 331 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 TRIM52Q96A61 297 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 PPEF1O14829 653 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 TLL1O43897 1013 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 UBTFP17480 764 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 GCGRP47871 477 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 CSPP1Q1MSJ5 1256 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 HLA-CQ95604 372 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 DACH1Q9UI36 760 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 SYNJ1O43426 1573 aa6.45□□□□□ -1.38
CDC42BPA-213ENST00000488131 A6NJR5 290 aa6.44□□□□□ -1.38
CDC42BPA-213ENST00000488131 ANP32CO43423 234 aa6.44□□□□□ -1.38
CDC42BPA-213ENST00000488131 TUSC1Q2TAM9 212 aa6.44□□□□□ -1.38
CDC42BPA-213ENST00000488131 LILRB3O75022 631 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 KDM4AO75164 1064 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 CD2BP2O95400 341 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 ANP32AP39687 249 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 DDX10Q13206 875 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 ZSCAN1Q8NBB4 408 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 PCDHGC3Q9UN70 934 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 RPIAP49247 311 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 GUCA2AQ02747 115 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 CABLES1Q8TDN4 633 aa6.43□□□□□ -1.38
CDC42BPA-213ENST00000488131 HOXA2O43364 376 aa6.42□□□□□ -1.38
CDC42BPA-213ENST00000488131 TRAK2O60296 914 aa6.42□□□□□ -1.38
CDC42BPA-213ENST00000488131 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
CDC42BPA-213ENST00000488131 FNBP4Q8N3X1 1017 aaPredicted RBP6.42□□□□□ -1.38
CDC42BPA-213ENST00000488131 SLC16A10Q8TF71 515 aa6.42□□□□□ -1.38
CDC42BPA-213ENST00000488131 SPDYE5A6NIY4 337 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 GJA5P36382 358 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 SCUBE3Q8IX30 993 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 BANK1Q8NDB2 785 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 SPSB2Q99619 263 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 SENP2Q9HC62 589 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 CCNB3Q8WWL7 1395 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 APBB1O00213 710 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 MTMR14Q8NCE2 650 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 COG6Q9Y2V7 657 aa6.41□□□□□ -1.38
CDC42BPA-213ENST00000488131 ERICH3Q5RHP9 1530 aa6.4□□□□□ -1.38
CDC42BPA-213ENST00000488131 FOXC1Q12948 553 aa6.4□□□□□ -1.39
CDC42BPA-213ENST00000488131 TMEM259Q4ZIN3 620 aa6.4□□□□□ -1.39
CDC42BPA-213ENST00000488131 RAB3GAP2Q9H2M9 1393 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 HOMEZQ8IX15 550 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 CYP4X1Q8N118 509 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 FDX1P10109 184 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 GLIPR1L2Q4G1C9 344 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 ARID3AQ99856 593 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 PKD2L1Q9P0L9 805 aa6.39□□□□□ -1.39
CDC42BPA-213ENST00000488131 RAPGEF2Q9Y4G8 1499 aa6.38□□□□□ -1.39
CDC42BPA-213ENST00000488131 USP46P62068 366 aa6.38□□□□□ -1.39
CDC42BPA-213ENST00000488131 FUT2Q10981 343 aa6.38□□□□□ -1.39
CDC42BPA-213ENST00000488131 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-213ENST00000488131 NCOA2Q15596 1464 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 PPM1GO15355 546 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 ZBTB24O43167 697 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms