RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
SND1-213ENST00000486037 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
SND1-213ENST00000486037 CRYBG1Q9Y4K1 1723 aa14.91□□□□□ -0.02
SND1-213ENST00000486037 SPATA31A1Q5TZJ5 1347 aa14.91□□□□□ -0.02
SND1-213ENST00000486037 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
SND1-213ENST00000486037 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
SND1-213ENST00000486037 C1QTNF8P60827 252 aa14.9□□□□□ -0.02
SND1-213ENST00000486037 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
SND1-213ENST00000486037 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
SND1-213ENST00000486037 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
SND1-213ENST00000486037 NBPF14Q5TI25 921 aa14.89□□□□□ -0.03
SND1-213ENST00000486037 PDGFDQ9GZP0 370 aaPredicted RBP14.89□□□□□ -0.03
SND1-213ENST00000486037 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
SND1-213ENST00000486037 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
SND1-213ENST00000486037 CASZ1Q86V15 1759 aa14.87□□□□□ -0.03
SND1-213ENST00000486037 MYOM1P52179 1685 aa14.87□□□□□ -0.03
SND1-213ENST00000486037 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.032e-7■■□□□ 12.7
SND1-213ENST00000486037 CHRNA2Q15822 529 aa14.86□□□□□ -0.03
SND1-213ENST00000486037 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
SND1-213ENST00000486037 PIK3C2GO75747 1445 aa14.84□□□□□ -0.03
SND1-213ENST00000486037 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
SND1-213ENST00000486037 PRDM11Q9NQV5 511 aa14.84□□□□□ -0.03
SND1-213ENST00000486037 USP35Q9P2H5 1018 aa14.84□□□□□ -0.03
SND1-213ENST00000486037 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
SND1-213ENST00000486037 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
SND1-213ENST00000486037 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
SND1-213ENST00000486037 PTGER2P43116 358 aa14.82□□□□□ -0.04
SND1-213ENST00000486037 PRR36Q9H6K5 1346 aa14.82□□□□□ -0.04
SND1-213ENST00000486037 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
SND1-213ENST00000486037 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
SND1-213ENST00000486037 SIRT1Q96EB6 747 aa14.81□□□□□ -0.04
SND1-213ENST00000486037 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
SND1-213ENST00000486037 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
SND1-213ENST00000486037 PDE3BQ13370 1112 aa14.8□□□□□ -0.04
SND1-213ENST00000486037 PTF1AQ7RTS3 328 aa14.8□□□□□ -0.04
SND1-213ENST00000486037 CHD4Q14839 1912 aa14.8□□□□□ -0.04
SND1-213ENST00000486037 BARGINQ6ZT62 677 aa14.79□□□□□ -0.04
SND1-213ENST00000486037 SSH2Q76I76 1423 aa14.79□□□□□ -0.04
SND1-213ENST00000486037 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
SND1-213ENST00000486037 PHRF1Q9P1Y6 1649 aaKnown RBP14.78□□□□□ -0.04
SND1-213ENST00000486037 SYT17Q9BSW7 474 aa14.78□□□□□ -0.04
SND1-213ENST00000486037 FHDC1Q9C0D6 1143 aaPredicted RBP14.78□□□□□ -0.04
SND1-213ENST00000486037 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
SND1-213ENST00000486037 ANKRD30BQ9BXX2 1392 aa14.77□□□□□ -0.04
SND1-213ENST00000486037 ZC3H6P61129 1189 aaKnown RBP14.77□□□□□ -0.05
SND1-213ENST00000486037 LARP1Q6PKG0 1096 aaKnown RBP14.77□□□□□ -0.05
SND1-213ENST00000486037 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.05
SND1-213ENST00000486037 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
SND1-213ENST00000486037 PEAK1Q9H792 1746 aa14.77□□□□□ -0.05
SND1-213ENST00000486037 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
SND1-213ENST00000486037 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
SND1-213ENST00000486037 PROM2Q8N271 834 aa14.76□□□□□ -0.05
SND1-213ENST00000486037 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
SND1-213ENST00000486037 C14orf93Q9H972 538 aaKnown RBP14.75□□□□□ -0.05
SND1-213ENST00000486037 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
SND1-213ENST00000486037 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
SND1-213ENST00000486037 NUTM2GQ5VZR2 741 aa14.74□□□□□ -0.05
SND1-213ENST00000486037 SBF2Q86WG5 1849 aa14.73□□□□□ -0.05
SND1-213ENST00000486037 PARP4Q9UKK3 1724 aaKnown RBP14.73□□□□□ -0.05
SND1-213ENST00000486037 TCP11L2Q8N4U5 519 aa14.73□□□□□ -0.05
SND1-213ENST00000486037 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
SND1-213ENST00000486037 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
SND1-213ENST00000486037 TULP4Q9NRJ4 1543 aa14.72□□□□□ -0.05
SND1-213ENST00000486037 LMO7Q8WWI1 1683 aa14.72□□□□□ -0.05
SND1-213ENST00000486037 PLSCR1O15162 318 aa14.72□□□□□ -0.05
SND1-213ENST00000486037 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
SND1-213ENST00000486037 EVA1CP58658 441 aa14.71□□□□□ -0.05
SND1-213ENST00000486037 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
SND1-213ENST00000486037 BCL11BQ9C0K0 894 aaPredicted RBP14.71□□□□□ -0.05
SND1-213ENST00000486037 POGKQ9P215 609 aa14.71□□□□□ -0.05
SND1-213ENST00000486037 DLC1Q96QB1 1528 aa14.71□□□□□ -0.06
SND1-213ENST00000486037 MINK1Q8N4C8 1332 aaPredicted RBP14.7□□□□□ -0.06
SND1-213ENST00000486037 OVOS2A0A0G2JMS6 1433 aa14.69□□□□□ -0.06
SND1-213ENST00000486037 OVOS2A0A0J9YW53 1432 aa14.69□□□□□ -0.06
SND1-213ENST00000486037 OVOS2Q6IE36 1432 aa14.69□□□□□ -0.06
SND1-213ENST00000486037 LRRC37A3O60309 1634 aa14.69□□□□□ -0.06
SND1-213ENST00000486037 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
SND1-213ENST00000486037 ATP7BP35670 1465 aa14.67□□□□□ -0.06
SND1-213ENST00000486037 ADGRB1O14514 1584 aa14.67□□□□□ -0.06
SND1-213ENST00000486037 WASLO00401 505 aaPredicted RBP14.66□□□□□ -0.06
SND1-213ENST00000486037 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
SND1-213ENST00000486037 THRAP3Q9Y2W1 955 aaKnown RBP14.66□□□□□ -0.06
SND1-213ENST00000486037 COL5A2P05997 1499 aaPredicted RBP14.65□□□□□ -0.06
SND1-213ENST00000486037 SLC15A2Q16348 729 aa14.65□□□□□ -0.06
SND1-213ENST00000486037 MTFR1LQ9H019 292 aa14.65□□□□□ -0.06
SND1-213ENST00000486037 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
SND1-213ENST00000486037 ARXQ96QS3 562 aa14.64□□□□□ -0.07
SND1-213ENST00000486037 STK32BQ9NY57 414 aa14.64□□□□□ -0.07
SND1-213ENST00000486037 CPDO75976 1380 aa14.63□□□□□ -0.07
SND1-213ENST00000486037 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
SND1-213ENST00000486037 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
SND1-213ENST00000486037 MAP3K5Q99683 1374 aa14.62□□□□□ -0.07
SND1-213ENST00000486037 GPR162Q16538 588 aa14.62□□□□□ -0.07
SND1-213ENST00000486037 USP19O94966 1318 aa14.62□□□□□ -0.07
SND1-213ENST00000486037 CRB1P82279 1406 aa14.61□□□□□ -0.07
SND1-213ENST00000486037 NUDT16Q96DE0 195 aaKnown RBP14.61□□□□□ -0.07
SND1-213ENST00000486037 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
SND1-213ENST00000486037 DDB1Q16531 1140 aa14.6□□□□□ -0.07
SND1-213ENST00000486037 ITSN1Q15811 1721 aa14.59□□□□□ -0.07
SND1-213ENST00000486037 ACEP12821 1306 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms