RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
RIF1-210ENST00000484077 GDF9O60383 454 aa11.01□□□□□ -0.65
RIF1-210ENST00000484077 TRIM32Q13049 653 aa11.01□□□□□ -0.65
RIF1-210ENST00000484077 EVA1BQ9NVM1 165 aa11.01□□□□□ -0.65
RIF1-210ENST00000484077 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
RIF1-210ENST00000484077 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
RIF1-210ENST00000484077 CSPP1Q1MSJ5 1256 aa11□□□□□ -0.65
RIF1-210ENST00000484077 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
RIF1-210ENST00000484077 LYPD8Q6UX82 237 aa11□□□□□ -0.65
RIF1-210ENST00000484077 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
RIF1-210ENST00000484077 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
RIF1-210ENST00000484077 CFAP99D6REC4 459 aa10.99□□□□□ -0.65
RIF1-210ENST00000484077 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
RIF1-210ENST00000484077 WNT7BP56706 349 aa10.99□□□□□ -0.65
RIF1-210ENST00000484077 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
RIF1-210ENST00000484077 POLR3EQ9NVU0 708 aa10.99□□□□□ -0.65
RIF1-210ENST00000484077 QPCTQ16769 361 aa10.98□□□□□ -0.65
RIF1-210ENST00000484077 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
RIF1-210ENST00000484077 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
RIF1-210ENST00000484077 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.97□□□□□ -0.65
RIF1-210ENST00000484077 WNT7AO00755 349 aa10.96□□□□□ -0.65
RIF1-210ENST00000484077 PPP2R2DQ66LE6 453 aa10.96□□□□□ -0.65
RIF1-210ENST00000484077 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
RIF1-210ENST00000484077 Q6ZNB5 142 aa10.95□□□□□ -0.66
RIF1-210ENST00000484077 RTL5Q5HYW3 569 aaPredicted RBP10.93□□□□□ -0.66
RIF1-210ENST00000484077 PTCRAQ6ISU1 281 aaPredicted RBP10.93□□□□□ -0.66
RIF1-210ENST00000484077 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
RIF1-210ENST00000484077 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
RIF1-210ENST00000484077 DGAT1O75907 488 aa10.92□□□□□ -0.66
RIF1-210ENST00000484077 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
RIF1-210ENST00000484077 SUPT5HO00267 1087 aaKnown RBP10.91□□□□□ -0.66
RIF1-210ENST00000484077 FOXC1Q12948 553 aa10.91□□□□□ -0.66
RIF1-210ENST00000484077 PCMTD1Q96MG8 357 aaPredicted RBP10.91□□□□□ -0.66
RIF1-210ENST00000484077 TNFRSF10AO00220 468 aa10.9□□□□□ -0.66
RIF1-210ENST00000484077 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
RIF1-210ENST00000484077 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.67
RIF1-210ENST00000484077 CTHP32929 405 aa10.89□□□□□ -0.67
RIF1-210ENST00000484077 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
RIF1-210ENST00000484077 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
RIF1-210ENST00000484077 ARMC2Q8NEN0 867 aa10.89□□□□□ -0.67
RIF1-210ENST00000484077 TSC1Q92574 1164 aa10.89□□□□□ -0.67
RIF1-210ENST00000484077 SKOR1P84550 965 aa10.88□□□□□ -0.67
RIF1-210ENST00000484077 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
RIF1-210ENST00000484077 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
RIF1-210ENST00000484077 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
RIF1-210ENST00000484077 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
RIF1-210ENST00000484077 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
RIF1-210ENST00000484077 SNIP1Q8TAD8 396 aaKnown RBP10.87□□□□□ -0.67
RIF1-210ENST00000484077 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
RIF1-210ENST00000484077 PER1O15534 1290 aaPredicted RBP10.86□□□□□ -0.67
RIF1-210ENST00000484077 MRGPRX2Q96LB1 330 aa10.86□□□□□ -0.67
RIF1-210ENST00000484077 SH3BP2P78314 561 aa10.85□□□□□ -0.67
RIF1-210ENST00000484077 ZNF511Q8NB15 262 aa10.85□□□□□ -0.67
RIF1-210ENST00000484077 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
RIF1-210ENST00000484077 FAM187AA6NFU0 413 aa10.84□□□□□ -0.67
RIF1-210ENST00000484077 BAP1Q92560 729 aa10.84□□□□□ -0.67
RIF1-210ENST00000484077 MAP10Q9P2G4 905 aa10.84□□□□□ -0.67
RIF1-210ENST00000484077 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
RIF1-210ENST00000484077 VARSP26640 1264 aaKnown RBP10.83□□□□□ -0.68
RIF1-210ENST00000484077 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
RIF1-210ENST00000484077 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
RIF1-210ENST00000484077 AVPP01185 164 aa10.82□□□□□ -0.68
RIF1-210ENST00000484077 CTDSPL2Q05D32 466 aa10.82□□□□□ -0.68
RIF1-210ENST00000484077 TMEM259Q4ZIN3 620 aa10.82□□□□□ -0.68
RIF1-210ENST00000484077 NBPF14Q5TI25 921 aa10.82□□□□□ -0.68
RIF1-210ENST00000484077 MPNDQ8N594 471 aa10.82□□□□□ -0.68
RIF1-210ENST00000484077 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
RIF1-210ENST00000484077 RFC5P40937 340 aa10.81□□□□□ -0.68
RIF1-210ENST00000484077 SIAH2O43255 324 aa10.8□□□□□ -0.68
RIF1-210ENST00000484077 CTC1Q2NKJ3 1217 aa10.8□□□□□ -0.68
RIF1-210ENST00000484077 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
RIF1-210ENST00000484077 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
RIF1-210ENST00000484077 MYT1Q01538 1121 aa10.79□□□□□ -0.68
RIF1-210ENST00000484077 LINC01559Q495D7 138 aa10.79□□□□□ -0.68
RIF1-210ENST00000484077 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
RIF1-210ENST00000484077 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
RIF1-210ENST00000484077 TARBP1Q13395 1621 aaKnown RBP10.79□□□□□ -0.68
RIF1-210ENST00000484077 IFT140Q96RY7 1462 aa10.79□□□□□ -0.68
RIF1-210ENST00000484077 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
RIF1-210ENST00000484077 CUX1P39880 1505 aa10.79□□□□□ -0.68
RIF1-210ENST00000484077 AP1G2O75843 785 aa10.78□□□□□ -0.68
RIF1-210ENST00000484077 BPHLQ86WA6 291 aaPredicted RBP10.78□□□□□ -0.68
RIF1-210ENST00000484077 BIVM-ERCC5R4GMW8 1640 aa10.77□□□□□ -0.68
RIF1-210ENST00000484077 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
RIF1-210ENST00000484077 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
RIF1-210ENST00000484077 PNMA1Q8ND90 353 aa10.77□□□□□ -0.69
RIF1-210ENST00000484077 LCE2BO14633 110 aa10.76□□□□□ -0.69
RIF1-210ENST00000484077 SMPD1P17405 629 aa10.76□□□□□ -0.69
RIF1-210ENST00000484077 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
RIF1-210ENST00000484077 FGD5Q6ZNL6 1462 aa10.75□□□□□ -0.69
RIF1-210ENST00000484077 SOCS7O14512 581 aa10.75□□□□□ -0.69
RIF1-210ENST00000484077 USP17L8P0C7I0 530 aa10.75□□□□□ -0.69
RIF1-210ENST00000484077 LRRN4Q8WUT4 740 aa10.75□□□□□ -0.69
RIF1-210ENST00000484077 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
RIF1-210ENST00000484077 FKBPLQ9UIM3 349 aa10.74□□□□□ -0.69
RIF1-210ENST00000484077 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
RIF1-210ENST00000484077 SH3RF1Q7Z6J0 888 aa10.73□□□□□ -0.69
RIF1-210ENST00000484077 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
RIF1-210ENST00000484077 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
RIF1-210ENST00000484077 J3QL48 77 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms